Job Description P69908 Confidence 99.68% Date Thu Jan 5 12:12:17 GMT 2012 Rank 209 Aligned Residues 357 % Identity 11% Template c2z61A_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable aspartate aminotransferase 2; PDBTitle: crystal structure of mj0684 from methanococcus jannaschii2 reveals its similarity in the active site to kynurenine3 aminotransferases Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		H	E	M	R	D	D	V	A	F	Q	I	I	N	D	E	L	Y	L	D	G	N	A	R	Q	N	L	A	T	F	C	Q	T	W	.	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P
Query Conservation																																			.
Alig confidence																			.																.
Template Conservation																			.
Template Sequence		E	S	F	E	V	M	D	I	L	A	L	A	Q	K	L	E	S	.	E	G	K	K	V	I	H	L	E	I	G	E	P	D	F	N	T	P	K	P	I	V	D	E	G	I	K	S	L	K	E	G	K	T	H	Y	T	D	S	R	G	I	L	E	L	R	E	K	I	S	E	L	Y	K	D	K	Y	K	A	D	I	I
Template Known Secondary structure					T	T													.	T	T										S		S	S																T	T			S				T	T																	S	S
Template Predicted Secondary structure																			.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R
Query Conservation
Alig confidence					.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Template Conservation					.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Template Sequence		P	D	N	.	.	.	I	I	I	T	G	G	S	S	L	G	L	F	F	A	L	S	S	I	.	.	.	.	.	.	.	.	.	.	.	.	I	D	D	G	D	E	V	L	I	Q	N	P	C	Y	P	C	Y	K	N	F	I	R	F	L	G	A	K	P	V	F	C	D	.	.	.	.	.	.	.	F	T	V	E	S
Template Known Secondary structure		G	G	G	.	.	.					S	S													.	.	.	.	.	.	.	.	.	.	.	.			T	T							S	S			T									T	T								.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure					.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Template SS confidence
		89	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.													110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.								.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S
Query Conservation
Alig confidence																												.												.	.	.	.	.	.
Template Conservation																												.												.	.	.	.	.	.
Template Sequence		L	E	E	A	L	S	D	K	T	K	A	I	I	I	N	S	P	S	N	P	L	G	E	V	I	D	.	R	E	I	Y	E	F	A	Y	E	N	I	.	.	.	.	.	.	P	Y	I	I	S	D	E	I	Y	N	G	L	V	Y	E	G	K	C	Y	S	A	I	E	F	D	E	N	L	E	K	T	I	L	I	N	G
Template Known Secondary structure								S	S								S	S		T	T	T						.												.	.	.	.	.	.	S							T	T	T	T		B	S	S	S					G	G	G	T		T	T		S	S
Template Predicted Secondary structure																												.												.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.							.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L
Query Conservation
Alig confidence								.																								.	.	.	.	.	.	.	.	.	.
Template Conservation								.																								.	.	.	.	.	.	.	.	.	.
Template Sequence		F	S	L	Y	A	M	.	T	G	W	R	I	G	Y	V	I	S	N	D	E	I	I	E	A	I	L	K	L	Q	Q	.	.	.	.	.	.	.	.	.	.	N	L	F	I	S	A	P	T	I	S	Q	Y	A	A	L	K	A	F	E	K	E	T	E	R	E	I	N	S	M	I	K	E	F	D	R	R	R	R	L	V
Template Known Secondary structure								.	G	G	G																					.	.	.	.	.	.	.	.	.	.			T	S	S	S									G	G	G	G	S
Template Predicted Secondary structure								.																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.											.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	.	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D
Query Conservation																																																							.
Alig confidence										.					.	.	.	.	.										.	.	.	.																							.													.	.								.	.
Template Conservation										.					.	.	.	.	.										.	.	.	.																																				.	.								.	.
Template Sequence		L	K	Y	V	K	D	F	G	.	W	E	V	N	.	.	.	.	.	N	P	I	G	A	Y	Y	V	F	.	.	.	.	P	N	I	G	E	D	G	R	E	F	A	Y	K	L	L	K	E	K	F	V	A	L	T	P	G	I	G	F	G	S	K	G	K	N	Y	.	.	I	R	I	S	Y	A	N	.	.	S	Y	E
Template Known Secondary structure								T	T	.		B			.	.	.	.	.				B	T	T				.	.	.	.		B		S	S																				G	G	G	G		G	G	G	S	S	B	.	.							S	.	.
Template Predicted Secondary structure										.					.	.	.	.	.										.	.	.	.																																				.	.								.	.
Template SS confidence
		290	.	.	.	.	.	.	.		.	.	300	.						.	.	.	.	.	.	.	.	310					.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.			.	.	.	.	350	.	.			.	.	.
		433	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	E	L	L	L	E	D	Y	K	A	S	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	K	E	G	L	E	R	I	K	E	F	L	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions