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Job DescriptionP69908
Confidence99.96%DateThu Jan 5 12:12:17 GMT 2012
Rank60Aligned Residues348
% Identity11%Templatec2w8wA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine palmitoyltransferase; PDBTitle: n100y spt with plp-ser
Resolution2.14 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60........ .70.........80.........90... ......100.........110.........120.......
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Query Sequence  DGNARQNLATFCQTWD. . DENVHKLMDLSINKNWIDKEEYPQS. . . AAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSS
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Template Sequence  RGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTYGSRMLNGTFHDHMEVEQALRDFYGTTG. . . . . . . AIVFSTGY
Template Known Secondary structure  TT
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TT
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SBTTTTT

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   63......70.........80.........90.........100.........110.........120....... ..130.....
 
   128.130.........140.........150.........160.........170.........180.........190.........200.......
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Query Sequence  EACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVP
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Template Sequence  MANLGIISTL. . . . . . . . . . . . AGKGEYVILDADSHASIYDGCQQGNAEIVRFRHN. S. VEDLDKRLGRLPKEPAKLVVL
Template Known Secondary structure  ............S
TT
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   136...140..... ....150.........160.........170......... 180 .........190.........200.
 
   208.210.........220.........230.........240.........250.........260.. .......270.........280......
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Query Sequence  TFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDF. RLPRVKSISASGHKFGLAPLGCGW
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Template Sequence  EGVYSMLGDIAPLKEMVAVAKKHG. . . . . . AMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVGGFVV
Template Known Secondary structure  STTTT

TT......

TTTTTTSSTTS

TT
TTT
SSTTTT
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   202.......210.........220..... ....230.........240.........250.........260.........270.....
 
   287..290.........300.........310.........320.........330.........340.........350.........360......
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Query Sequence  VIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFI
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Template Sequence  SNHPKFEAVRLACR. . . . . . . . . . . . . PYIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAMG. FRLG
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TTGGG
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   276...280......... 290.........300.........310.........320.........330....... ..340.
 
   367..370.........380.........390.........400.........410.........420.........430.........440......
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Query Sequence  CTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLK
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Template Sequence  TETCDS. . . AIVAVMLED. . . . QEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGR
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SS

S...SSS....TT

TTTS
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TT

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   342..... ..350...... ...360.........370.........380.........390.........400.........410....
 
   447.
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Query Sequence  YL
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Template Sequence  AV
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   415.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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