Job Description P69908 Confidence 99.73% Date Thu Jan 5 12:12:17 GMT 2012 Rank 199 Aligned Residues 332 % Identity 14% Template c2cy8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:d-phenylglycine aminotransferase; PDBTitle: crystal structure of d-phenylglycine aminotransferase (d-phgat) from2 pseudomonas strutzeri st-201 Resolution 2.30 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		L	D	G	N	A	R	Q	N	L	A	T	F	C	Q	T	W	.	.	.	.	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S
Query Conservation																		.	.	.	.
Alig confidence																		.	.	.	.																																						.	.	.	.	.	.						.	.	.	.
Template Conservation																																																											.	.	.	.	.	.						.	.	.	.
Template Sequence		V	D	G	N	V	Y	L	D	F	F	G	G	H	G	A	L	V	L	G	H	G	H	P	R	V	N	A	A	I	A	E	A	L	S	H	G	V	Q	Y	A	A	S	H	P	L	E	V	R	W	A	E	R	I	V	A	A	F	.	.	.	.	.	.	P	S	I	R	K	.	.	.	.	L	R	F	T	G	S	G	T
Template Known Secondary structure		T	T							S		T	T	T	T	S		T	T		B	T													T	T	T		S	S		S	S																.	.	.	.	.	.	T	T		S		.	.	.	.					S
Template Predicted Secondary structure																																																											.	.	.	.	.	.						.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110							.	.	.	.	.					.	.	.	.	120	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.				200	.	.	.	.
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	.	.	.	E	N	T	I	G
Query Conservation																																																																										.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.											.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template Sequence		E	T	T	L	L	A	L	R	V	A	R	A	F	.	.	.	.	.	.	.	.	.	.	.	T	G	R	R	M	I	L	R	F	E	G	T	T	A	.	.	.	.	.	.	.	.	.	.	N	T	L	L	I	R	P	D	.	.	.	.	.	.	D	I	E	G	M	R	E	V	F	A	N	H	G	S	D	I	A	A
Template Known Secondary structure															.	.	.	.	.	.	.	.	.	.	.													G	G	.	.	.	.	.	.	.	.	.	.	G						T	T	.	.	.	.	.	.													G	G	G
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.												.	.	.	140	.	.	.	.	.	.	.	.	.	150											.	.	.	.	.	.	.	.							.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	.	.	.	.	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.													.	.	.	.	.	.																											.	.	.								.	.
Template Conservation																																	.	.	.	.	.	.																											.	.	.								.	.
Template Sequence		F	I	A	E	P	V	G	S	H	F	G	V	T	P	V	S	D	S	F	L	R	E	G	A	E	L	A	R	Q	Y	G	.	.	.	.	.	.	A	L	F	I	L	D	E	V	I	S	G	F	R	V	G	N	H	G	M	Q	A	L	L	D	V	Q	.	.	.	P	D	L	T	C	L	A	.	.	K	A	S	A	G
Template Known Secondary structure						S	S						T																		T	T	.	.	.	.	.	.								T	T	T	T	T	T	T		T	T							T			.	.	.		S						.	.	G	G	G	G	T
Template Predicted Secondary structure																																	.	.	.	.	.	.																											.	.	.								.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.							.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.			.	270	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	P	G	G	I	L	G	G	R	E	D	V	M	G	V	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	S	F	T	G	N	P	I	T	A	A	A	A	I	A	A	I	D	T	I	L	E	D	D	V	C	A	K	I	N	D	L	G	Q	F	A	R	E	A	M	N	H	L	F	A	R
Template Known Secondary structure		T	S	S												T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																							T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.																.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390														.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	L	N	W	L	A	Y	G	.	.	R	F	S	G	F	H	L	M	P	G	L	P	P	N	T	T	D	T	G	S	I	T	R	A	E	V	A	R	P	D	V	K	M	I	A	A	M	R	M	A	L	I	L	E	G	V	D	I	G	G	R	.	.	.	.	.	.	.	.	.	.	.	G	S	V	F	L	S	A
Template Known Secondary structure		T	T								.	.		T	T							T	S		T	T									T	T		S																		T	T				B	T	T	.	.	.	.	.	.	.	.	.	.	.	T						T
Template Predicted Secondary structure											.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		348	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.												.	.	410	.	.	.	.
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y	L	S	D	H	P	K	L	Q	G	I	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	H	E	R	E	H	V	E	H	L	V	T	T	F	D	R	V	L	D	R	L	A	D	E	N	L	L	S	W	Q	G	T
Template Known Secondary structure		T																							T	T							.
Template Predicted Secondary structure
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions