 |
| Job Description | P0CE55 | | Confidence | 5.91% | Date | Thu Jan 5 11:30:25 GMT 2012 |
| Rank | 37 | Aligned Residues | 21 |
| % Identity | 10% | Template | d1r6ra_ |
| SCOP info | Flavivirus capsid protein C
| Flavivirus capsid protein C
| Flavivirus capsid protein C
|
| Resolution | UNK |
|
| | |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
| Predicted Secondary structure | |
 | | | | | |
|
|
|
|
|
|
|
|
|
|
| | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
A | S | M | R | L | F | A | R | L | S | L | D | S | A | L | P | D | R | T | T | I | M | N | F | R | H |
| Query Conservation | |
| | |
| |
| |
| | | | | | | |
|
| |
|
|
| |
|
|
| |
| Alig confidence | |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
|
|
| | . | . | . | . | . | |
|
|
| | | | |
|
| |
|
| Template Sequence | |
V | A | F | L | R | F | L | T | I | . |
. |
. |
. |
. |
P | P | T | A | G | I | L | K | R | W | G | T |
| Template Known Secondary structure | |
| | | | | | | T |
| . | . | . | . | . |
|
|
| | | | | | | | T | S |
| Template Predicted Secondary structure | |
| | | | | | |
|
| . | . | . | . | . |
|
|
| | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
51 | . | . | . | . | . | . | . | . | |
|
|
|
|
60 | . | . | . | . | . | . | . | . | . | 70 | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
