Job Description P0CE55 Confidence 98.20% Date Thu Jan 5 11:30:25 GMT 2012 Rank 1 Aligned Residues 187 % Identity 12% Template d1musa_ SCOP info Ribonuclease H-like motif Ribonuclease H-like Transposase inhibitor (Tn5 transposase) Resolution 1.90

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		L	L	E	Q	H	Q	L	A	R	Q	L	F	K	T	I	N	R	W	L	A	E	A	G	V	M	M	T	Q	G	T	L	V	D	A	T	I	I	E	A	P	S	S	T	K	N	K	E	Q	Q	R	D	P	E	M	H	Q	T	K	K	G	N	Q	W	H	F	G	M	K	A	H	.	.	I	G	V	D	A	K	S	G
Query Conservation																																																																								.	.
Alig confidence																											.	.	.										.	.	.	.	.	.	.																											.	.
Template Conservation																											.	.	.										.	.	.	.	.	.	.
Template Sequence		N	V	S	A	E	A	I	R	K	A	G	A	M	Q	T	V	K	L	A	Q	E	F	P	E	L	.	.	.	L	A	I	E	D	T	T	S	L	.	.	.	.	.	.	.	S	Y	R	H	Q	V	A	E	E	L	G	K	L	G	S	I	Q	K	A	S	R	G	W	W	V	H	S	V	L	L	L	E	A	T	T	F
Template Known Secondary structure		T																			T	T		S			.	.	.										.	.	.	.	.	.	.				S	G	G	G	G	G	S	B		S	S	S	T	T		S														T	T	T
Template Predicted Secondary structure																											.	.	.										.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.								.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220																					.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		L	T	H	S	L	V	T	T	A	A	N	E	H	D	L	N	Q	L	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	H	G	E	E	Q	F	V	.	S	A	D	A	G	Y	Q	G	A	P	Q	R	E	E	L	A	E	V	D	V	D	W	L	I	A	E	R	P	G	K
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence						.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation						.	.
Template Sequence		R	T	V	G	.	.	L	L	H	Q	E	W	W	M	R	P	D	D	P	A	D	A	D	E	K	E	S	G	K	W	L	A	A	A	A	T	S	R	L	R	M	G	S	M	M	S	N	V	I	A	V	C	D	R	E	A	D	I	H	A	Y	L	Q	D	K	L	A	H	N	E	R	F	V	V	R	S	K	H	P	R
Template Known Secondary structure						.	.											S	S	G	G	G		S	S		G	G	G														G	G	G	G	G	G							G	G	G												T	T									S
Template Predicted Secondary structure						.	.
Template SS confidence
		138	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		260	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	R	T	L	K	Q	H	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	D	V	E	S	G	L	Y	L	Y	D	H	L	K	N	Q	P	E	L	G	G	Y	Q	I	S	I	P	Q	K	G	V	V	D	K	R	G	K	R	K	N	R	P	A	R	K	A	S	L	S	L	R	S	G	R	I	T	L	K	Q	G	N	I	T	L	N	A	V	L	A	E	E	I	N	P	P	K	G	E	T	P
Template Known Secondary structure		B		T	T	T		S	B							T	S																		S	S																							T	G	G	G												S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
													269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	K	N	K	T	A	I	N	I	E	Y	M	K	A	S	I	R	A	R	V	E	H	P	F	R	I	I	K	R	Q	F	G	F	V	K	A	R	Y	K	G	L	L	K	N	D	N	Q	L	A	M	L	F	T	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	W	L	L	L	T	S	E	P	V	E	S	L	A	Q	A	L	R	V	I	D	I	Y	T	H	R	W	R	I	E	E	F	H	K	A	W	K	T	G	A	G	A	E	R	Q	R	M	E	K	P	D	N	L	E	R	M	V	S	I	L	S	F	V
Template Known Secondary structure									S	S			S	S													T	T												T	T	T		G	G	G				S	S
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions