Job Description P0CE55 Confidence 4.16% Date Thu Jan 5 11:30:25 GMT 2012 Rank 71 Aligned Residues 48 % Identity 21% Template c2k27A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:paired box protein pax-8; PDBTitle: solution structure of human pax8 paired box domain Resolution UNK

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	R	R	P	Y	P	L	E	T	M	L	R	I	H	C	M	Q	H	W	Y	N	L	S	D	G	A	M	E	D	A	L	Y	E	I	A	S	M	R	L	F	A	R	L	S	L	D	S	A	L	P	D	R	T	T	I	M	N	F	R	H	L	L	E	Q	H	Q
Query Conservation
Alig confidence						.													.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.													.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	G	R	P	.	L	P	E	V	V	R	Q	R	I	V	D	L	.	A	H	Q	G	V	R	P	C	D	I	S	R	Q	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	H	G	C	V	S	K	I	L	G	R	Y	Y	E	T	G
Template Known Secondary structure		S	S		S	.	S												.				T											T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S										S	S	T	T	S
Template Predicted Secondary structure						.													.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions