Job Description Q46893 Confidence 98.64% Date Thu Jan 5 12:35:35 GMT 2012 Rank 63 Aligned Residues 146 % Identity 12% Template d1vm8a_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases UDP-glucose pyrophosphorylase Resolution 2.50

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.												50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																													.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	C	A	V	V	P	A	A	G	F	G	R	R	M	Q	T	E	C	P	K	Q	Y	L	S	I	G	.	.	.	N	Q	T	I	L	E	H	S	V	H	A	L	L	A	H	P	.	.	.	.	.	.	.	.	.	.	.	R	V	K	R	V	V	I	A	I	S	P	G	D	S	R	F	A	Q	L	P	L	A	N
Query Conservation																													.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	A	V	L	L	L	A	G	G	Q	G	T	R	L	G	V	S	Y	P	K	G	X	Y	D	V	G	L	P	S	H	K	T	L	F	Q	I	Q	A	E	R	I	L	K	L	Q	Q	L	A	E	K	H	H	G	N	K	C	T	I	P	W	Y	I	X	T	S	G	R	T	X	E	S	T	K	E	F	F	T	K	H
Template Known Secondary structure											S	B		T	T	T	T		S	S	B	G	G	G		B				T	T			B																					S	S												T	T	T											T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		73	.	.	.	.	.																																	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.				.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.									.	.													.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.									.	.													.	.	.
Query Sequence		H	P	Q	I	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	G	G	D	E	R	A	D	S	V	L	A	.	.	G	L	K	A	A	G	D	A	.	.	Q	W	V	L	V	H	D	A	A	R	P	C	.	.	.	L	H
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.									.	.													.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.									.	.													.	.	.
Template Conservation
Template Sequence		K	F	F	G	L	K	K	E	N	V	V	F	F	Q	Q	G	X	L	P	A	X	S	F	D	G	K	I	I	L	E	E	K	N	K	V	S	X	A	P	D	G	N	G	G	L	Y	R	A	L	A	A	Q	N	I	V	E	D	X	E	Q	R	G	I	C	S	I	H	V	Y	C	V	D	N	I	L	V	K	V	A	D
Template Known Secondary structure		G	G	G	G	S		G	G	G														T	T	S		B					T	T									T	T									T	T									T									T	T	B	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	D	L	A	R	L	L	A	L	S	E	T	S	R	T	G	G	I	L	A	A	P	V	R	D	T	M	K	R	A	E	P	G	K	N	A	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	R	F	I	G	F	C	I	Q	K	G	A	D	C	G	A	K	V	V	E	K	T	N	P	T	E	P	V	G	V	V	C	R	V	D	G	V	Y	Q
Template Known Secondary structure											T	T		S										S	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions