Job Description Q46893 Confidence 99.93% Date Thu Jan 5 12:35:35 GMT 2012 Rank 50 Aligned Residues 207 % Identity 14% Template d1vh1a_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.60

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	A	V	V	P	A	A	G	F	G	R	R	M	Q	T	E	C	P	K	Q	Y	L	S	I	G	N	Q	T	I	L	E	H	S	V	H	A	L	L	A	H	P	R	V	K	R	V	V	I	A	I	S	P	G	D	S	R	F	A	Q	L	P	L	A	N	H	P	Q	I	T	V	V	D	G	G	D	E	R	A	D
Query Conservation
Alig confidence									.	.	.	.	.																																																				.	.	.	.	.
Template Conservation									.	.	.	.	.																																																				.	.	.	.	.
Template Sequence		F	V	V	I	I	P	A	.	.	.	.	.	R	Y	A	S	T	P	G	K	P	L	V	D	I	N	G	K	P	X	I	V	H	V	L	E	R	A	R	E	S	G	A	E	R	I	I	V	A	T	D	H	E	D	V	A	R	A	V	E	A	A	G	.	.	.	.	.	G	E	V	C	X	T	R	G	T	E	R	L
Template Known Secondary structure									.	.	.	.	.								T	T	T				T	T														T	T		S							S											T	T	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.																																																				.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.						10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.	.	.	70	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.										.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.																					.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.																					.	.
Query Sequence		S	V	L	A	G	L	K	A	A	G	D	A	Q	W	V	L	V	H	D	A	A	R	P	C	L	H	Q	D	D	L	A	R	L	L	A	L	S	E	T	S	R	T	G	G	I	L	A	A	P	.	.	.	.	.	.	.	.	.	V	R	D	T	M	K	R	A	E	P	G	K	N	A	I	A	H	T	V	D	.	.
Query Conservation																																																			.	.	.	.	.	.	.	.	.																					.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		A	E	V	V	E	K	C	A	F	S	D	D	T	V	I	V	N	V	Q	G	D	E	P	X	I	P	A	T	I	I	R	Q	V	A	D	N	L	A	Q	R	Q	V	G	X	A	T	L	A	V	P	I	H	N	A	E	E	A	F	N	P	N	A	V	K	V	V	L	D	A	E	G	Y	A	L	Y	F	S	R	A	T
Template Known Secondary structure								T	T			T	T								T	T		T	T																S	S	S	S															T		T	T	S							T	T	S	B						S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
																	157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																											.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																											.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	G	L	W	H	A	L	T	P	Q	F	F	P	R	E	L	L	H	D	C	L	T	R	.	.	A	L	N	E	G	A	T	I	T	D	E	A	S	A	L	E	Y	C	G	F	H	P	Q	L	V	E	.	G	R	A	D	N	I	K	V	T	R	P	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																											.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																.											.
Template Conservation																																																										.
Template Sequence		I	P	W	D	R	D	R	F	A	E	G	L	E	T	V	G	D	N	F	L	R	H	L	G	I	Y	G	Y	R	A	G	F	I	R	R	Y	V	N	W	Q	P	S	P	L	E	H	I	E	X	L	E	Q	L	R	V	L	.	W	Y	G	E	K	I	H	V	A	V	A	Q	E	V	P	G	T	G	V	D	T	P	E
Template Known Secondary structure		S	S							S	S							S																						S										T		T	T					.		T	T									S	S								S
Template Predicted Secondary structure																																																										.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	A	L	A	E	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	E	R	V	R	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions