Job Description Q46893 Confidence 99.98% Date Thu Jan 5 12:35:35 GMT 2012 Rank 17 Aligned Residues 219 % Identity 12% Template d1qwja_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.80

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.				80	.
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		H	L	D	V	C	A	V	V	P	A	A	G	F	G	R	R	M	Q	T	E	C	P	K	Q	Y	L	S	I	G	N	Q	T	I	L	E	H	S	V	H	A	L	L	A	H	P	R	V	K	R	V	V	I	A	I	S	P	G	D	S	R	F	A	Q	L	P	L	A	N	H	P	Q	I	T	V	V	.	.	.	D	G
Query Conservation																																																																													.	.	.
Alig confidence																				.	.	.																																																							.	.	.
Template Conservation																				.	.	.
Template Sequence		P	P	H	L	A	A	L	V	L	A	R	G	G	S	K	G	I	P	.	.	.	L	K	N	I	K	R	L	A	G	V	P	L	I	G	W	V	L	R	A	A	L	D	A	G	V	F	Q	S	V	W	V	S	T	D	H	D	E	I	E	N	V	A	K	Q	F	G	A	Q	V	H	R	R	S	S	E	T	S	K	D
Template Known Secondary structure													S			S	S	S	S	.	.	.		T	T	T	S			T	T															T			S							S											T	T								G	G	G	S	S	T
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	E	R	A	D	S	V	L	A	G	L	K	A	A	G	D	A	Q	W	V	L	V	H	D	A	A	R	P	C	L	H	Q	D	D	L	A	R	L	L	A	L	S	E	T	S	R	T	G	G	I	L	A	A	P	V	R	D	T	M	K	R	A	E	P	G	K	N	A	I	A	H	T	V	D	R	N	G	L	W
Query Conservation
Alig confidence																																																														.	.	.	.
Template Conservation																																																														.	.	.	.
Template Sequence		S	S	T	S	L	D	A	I	V	E	F	L	N	Y	H	N	E	V	D	I	V	G	N	I	Q	A	T	S	P	C	L	H	P	T	D	L	Q	K	V	A	E	M	I	R	E	E	G	Y	D	S	V	F	S	V	V	R	R	H	Q	F	.	.	.	.	R	W	S	E	I	Q	K	G	V	R	E	V	T	E	P	L
Template Known Secondary structure		T												T	T		T	T		S							T	T		T	T															S	S			S												.	.	.	.		B					S	S	T	T					B	S
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		H	A	L	T	P	Q	F	F	P	R	E	L	L	H	D	C	L	T	R	A	L	N	E	G	A	T	I	T	D	E	A	S	A	L	E	Y	C	G	F	H	P	Q	L	V	E	.	G	R	A	D	N	I	K	V	T	R	P	E	D	L	A	L	A	E	F	Y	L	T	R	T
Query Conservation																																															.
Alig confidence																																															.
Template Conservation
Template Sequence		N	L	N	P	A	K	R	P	R	R	Q	D	W	D	G	E	L	Y	E	N	G	S	F	Y	F	A	K	R	H	L	I	E	M	G	Y	L	Q	G	G	K	M	A	Y	Y	E	M	R	A	E	H	S	V	D	I	D	V	D	I	D	W	P	I	A	E	Q	R	V	L	R	F
Template Known Secondary structure		S	S	B	T	T	B				T	T	T	S																				T	T		S	S		S	S								G	G	G									S
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions