Job Description Q46893 Confidence 99.96% Date Thu Jan 5 12:35:35 GMT 2012 Rank 28 Aligned Residues 217 % Identity 11% Template d1jyka_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 1.50

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																				.	.	.																																									.
Query SS confidence																				.	.	.																																									.
Query Sequence		H	L	D	V	C	A	V	V	P	A	A	G	F	G	R	R	M	Q	.	.	.	T	E	C	P	K	Q	Y	L	S	I	G	N	Q	T	I	L	E	H	S	V	H	A	L	L	A	H	P	R	V	K	R	V	V	I	A	I	S	P	G	D	.	S	R	F	A	Q	L	P	L	A	N	H	P	Q	I	T	V	V	D
Query Conservation																				.	.	.																																									.
Alig confidence																				.	.	.																																									.
Template Conservation
Template Sequence		E	I	R	V	K	A	I	I	L	A	A	G	L	G	T	R	L	R	P	L	T	E	N	T	P	K	A	L	V	Q	V	N	Q	K	P	L	I	E	Y	Q	I	E	F	L	K	E	K	G	I	N	D	I	I	I	I	V	G	Y	L	K	E	Q	F	D	Y	L	K	E	K	Y	G	V	R	L	V	F	N	D	K	Y
Template Known Secondary structure													S			G	G	G	T	T	T	T	S	S	S		G	G	G				T	T														T	T										T	T	G	G	G	G	T														T	T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	D	E	R	A	D	S	V	L	A	G	L	K	A	A	G	D	A	Q	W	V	L	V	H	D	A	A	R	P	C	L	H	Q	D	D	L	A	R	L	L	A	L	S	E	T	S	R	T	G	G	I	L	A	A	P	V	R	D	T	M	K	R	A	E	P	G	K	N	A	I	A	H	T	V	D	R	N	G	L
Query Conservation
Alig confidence																		.	.	.																.	.	.	.
Template Conservation																		.	.	.																.	.	.	.
Template Sequence		A	D	Y	N	N	F	Y	S	L	Y	L	V	K	E	E	L	.	.	.	A	N	S	Y	V	I	D	A	D	N	Y	L	F	K	N	.	.	.	.	X	F	R	N	D	L	T	R	S	T	Y	F	S	V	Y	R	E	D	C	T	N	E	W	F	L	V	Y	G	D	D	Y	K	V	Q	D	I	I	V	D	S	K	A
Template Known Secondary structure		T	T	S		T						T	T	G	G	G		.	.	.	T	T						T	T				S	S		.	.	.	.				S				S									S	S		S	S								T	T		B									S	S
Template Predicted Secondary structure																		.	.	.																.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.								.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.																								.
Query SS confidence																									.	.	.	.	.	.	.																								.
Query Sequence		W	H	A	L	T	P	Q	F	F	P	R	E	L	L	H	D	C	L	T	R	A	L	N	.	.	.	.	.	.	.	E	G	A	T	I	T	D	E	A	S	A	L	E	Y	C	G	F	H	P	Q	L	V	E	.	G	R	A	D	N	I	K	V	T	R	P	E	D	L	A	L	A	E	F	Y	L	T
Query Conservation																									.	.	.	.	.	.	.																								.
Alig confidence																									.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		G	R	I	L	S	G	V	S	F	W	D	A	P	T	A	E	K	I	V	S	F	I	D	K	A	Y	V	S	G	E	F	V	D	L	Y	W	D	N	X	V	K	D	N	I	K	E	L	D	V	Y	V	E	E	L	E	G	N	S	I	Y	E	I	D	S	V	Q	D	Y	R	K	L	E	E	I	L	K
Template Known Secondary structure				B			S																					T	T	T			T	T			T	T					T	T	G	G	G										T	T	S						S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions