Job Description Q46893 Confidence 99.96% Date Thu Jan 5 12:35:35 GMT 2012 Rank 25 Aligned Residues 228 % Identity 16% Template d1iina_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases glucose-1-phosphate thymidylyltransferase Resolution 2.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.	.	.	.	.
Predicted Secondary structure						.														.	.	.																																														.	.	.	.	.
Query SS confidence						.														.	.	.																																														.	.	.	.	.
Query Sequence		L	D	V	C	.	A	V	V	P	A	A	G	F	G	R	R	M	Q	.	.	.	T	E	C	P	K	Q	Y	L	S	I	G	N	Q	T	I	L	E	H	S	V	H	A	L	L	A	H	P	R	V	K	R	V	V	I	A	I	S	P	G	D	S	R	F	A	Q	.	.	.	.	.	L	P	L	A	N	H	P	Q	I
Query Conservation						.														.	.	.																																														.	.	.	.	.
Alig confidence						.														.	.	.																																														.	.	.	.	.
Template Conservation
Template Sequence		M	K	T	R	K	G	I	I	L	A	G	G	S	G	T	R	L	Y	P	V	T	M	A	V	S	Q	Q	L	L	P	I	Y	D	K	P	M	I	Y	Y	P	L	S	T	L	M	L	A	G	I	R	D	I	L	I	I	S	T	P	Q	D	T	P	R	F	Q	Q	L	L	G	D	G	S	Q	W	G	L	N	L	Q	Y
Template Known Secondary structure													S			G	G	G	T	T	T	T	S	S	S		G	G	G	S			T	T			T	T										T	T										T	T	T									T	T	S	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																																		.	.	.	.
Query SS confidence																																																																		.	.	.	.
Query Sequence		T	V	V	D	G	G	D	E	R	A	D	S	V	L	A	G	L	K	A	A	G	D	A	Q	W	V	L	V	H	D	A	A	R	P	C	L	H	Q	D	D	L	A	R	L	L	A	L	S	E	T	S	R	T	G	G	I	L	A	A	P	V	R	D	T	.	.	.	.	M	K	R	A	E	P	G	K	N	A	I	A
Query Conservation																																																																		.	.	.	.
Alig confidence																																		.	.																															.	.	.	.
Template Conservation																																		.	.
Template Sequence		K	V	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	E	F	I	G	H	D	D	C	A	L	V	L	G	D	N	.	.	I	F	Y	G	H	D	L	P	K	L	M	E	A	A	V	N	K	E	S	G	A	T	V	F	A	Y	H	V	N	D	P	E	R	Y	G	V	V	E	F	D	Q	K	G	T	A	V
Template Known Secondary structure					S	S				T	T						T					T	T	S							T	T		.	.					T	T												S	S	S									S		G	G	G	S							S	S	S
Template Predicted Secondary structure																																		.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure															.	.	.	.														.	.																																	.
Query SS confidence															.	.	.	.														.	.																																	.
Query Sequence		H	T	V	D	R	N	G	L	W	H	A	L	T	.	.	.	.	P	Q	F	F	P	R	E	L	L	H	D	C	L	.	.	T	R	A	L	N	E	G	A	T	I	T	D	E	A	S	A	L	E	Y	C	G	F	H	P	Q	L	V	E	G	R	A	D	.	N	I	K	V	T	R	P	E	D	L	A	L	A	E	F
Query Conservation															.	.	.	.														.	.																																	.
Alig confidence															.	.	.	.														.	.																																	.
Template Conservation
Template Sequence		S	L	E	E	K	P	L	Q	P	K	S	N	Y	A	V	T	G	L	Y	F	Y	D	N	S	V	V	E	M	A	K	N	L	K	P	S	A	R	G	E	L	E	I	T	D	I	N	R	I	Y	M	E	Q	G	R	L	S	V	A	M	M	G	R	G	Y	A	W	L	D	T	G	T	H	Q	S	L	I	E	A	S	N
Template Known Secondary structure						S		S	S		S		S											T	T												T	T	S	S													T	T									T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	T	R	T	I	H	Q	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	A	T	I	E	E	R	Q	G
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions