Job Description Q46893 Confidence 100.00% Date Thu Jan 5 12:35:35 GMT 2012 Rank 13 Aligned Residues 222 % Identity 10% Template c3oamD_ PDB info PDB header:transferase Chain: D: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase; PDBTitle: crystal structure of cytidylyltransferase from vibrio cholerae Resolution 1.75 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	V	C	A	V	V	P	A	A	G	F	G	R	R	M	Q	T	E	C	P	K	Q	Y	L	S	I	G	N	Q	T	I	L	E	H	S	V	H	A	L	L	A	H	P	R	V	K	R	V	V	I	A	I	S	P	G	D	S	R	F	A	Q	L	P	L	A	N	H	P	Q	I	T	V	V	D	G	G	D	E	R
Query Conservation
Alig confidence																				.	.	.
Template Conservation																				.	.	.
Template Sequence		M	S	F	T	V	V	I	P	A	R	Y	Q	S	T	R	L	P	G	.	.	.	K	P	L	A	D	I	G	G	K	P	M	I	Q	W	V	Y	E	Q	A	M	Q	A	G	A	D	R	V	I	I	A	T	D	D	E	R	V	E	Q	A	V	Q	A	F	G	G	V	V	C	M	T	S	P	N	H	Q	S	G	T	E
Template Known Secondary structure												S			S	S	S	T	T	.	.	.	G	G	G				T	T														T	T		S							S											T	T								S	S	S			S
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.										.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.
Query Sequence		A	D	S	V	L	A	G	L	K	A	A	G	D	A	Q	W	V	L	V	H	D	A	A	R	P	C	L	H	Q	D	D	L	A	R	L	L	A	L	S	E	T	S	R	T	G	G	I	L	A	A	P	V	R	D	T	M	K	.	.	.	.	.	.	.	.	.	R	A	E	P	G	K	N	A	I	A	H	T	V	D
Query Conservation																																																											.	.	.	.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	A	E	V	V	A	K	M	A	I	P	A	D	H	I	V	V	N	V	Q	G	D	E	P	L	I	P	P	A	I	I	R	Q	V	A	D	N	L	A	A	C	S	A	P	M	A	T	L	A	V	E	I	E	D	E	A	E	V	F	N	P	N	A	V	K	V	I	T	D	K	S	G	Y	A	L	Y	F	S	R
Template Known Secondary structure										T	T			T	T								T	T		T	T															T	S	S		S															T		T	T	S							T	T	S	B						S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		157	.																	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.												.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.												.
Query Sequence		R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	W	H	A	L	T	P	Q	F	F	P	R	E	L	L	H	D	C	L	T	R	A	L	N	E	G	A	T	I	T	D	E	A	S	A	L	.	.	E	Y	C	G	F	H	P	Q	L	V	E	.	G	R	A	D	N	I	K	V	T	R	P
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.												.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.												.
Template Conservation
Template Sequence		A	T	I	P	W	D	R	D	N	F	A	K	A	D	K	A	I	V	Q	P	L	L	R	H	I	G	I	Y	A	Y	R	A	G	F	I	N	T	Y	L	D	W	Q	P	S	Q	L	E	K	I	E	C	L	E	Q	L	R	V	L	W	H	G	E	K	I	H	V	A	V	A	L	E	A	P	P	A	G	V	D	T	P
Template Known Secondary structure		S		S	S							T	S	S	S					S																						S										T		T	T						T	T									S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	L	A	L	A	E	F	Y	L	T	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	L	E	V	V	R	R	I	V	A	E	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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