Return to main results Retrieve Phyre Job Id

Job DescriptionQ46893
Confidence99.94%DateThu Jan 5 12:35:35 GMT 2012
Rank40Aligned Residues224
% Identity14%Templatec3jukA_
PDB info PDB header:transferaseChain: A: PDB Molecule:udp-glucose pyrophosphorylase (galu); PDBTitle: the crystal structure of udp-glucose pyrophosphorylase complexed with2 udp-glucose
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.. .......30.........40.........50.........60.........70....
Predicted Secondary structure 










...



















........
Query SS confidence 
















. . .



















































. . . . . . . .
Query Sequence  LDVCAVVPAAGFGRRMQ. . . TECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHP. . . . . . . .
Query Conservation 
 
 






 



 ...   

 
  
 




   
  
        


                  ........
Alig confidence 
















...



















































........
Template Conservation 
  







 



 


   

 



 




   
  
   

  
 

       
   
              
Template Sequence  MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYTNKENALKSI
Template Known Secondary structure 




S

GGGTTGGGTS
GGG
BSSSSBT


TTTS




Template Predicted Secondary structure 








































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   75....80.........90.........100........ .110.........120.........130.........140
Predicted Secondary structure  .........
















...













..
Query SS confidence  . . . . . . . . .

































. . .































. .
Query Sequence  . . . . . . . . . QITVVDGGDERADSVLAGLKAAGDAQWVLVHDAA. . . RPCLHQDDLARLLALSETSRTGGILAAPVRDT. .
Query Conservation  .........             
   
       
       
... 


    
   
          
        ..
Alig confidence  .........






















.









...































..
Template Conservation                        
         .     
   
                                     
Template Sequence  RNIIEKCCFSYVRQKQMKGLGHAILTGEALIG. NEPFAVILADDLCISHDHPSVLKQMTSLYQKYQCSIVAIEEVALEEV
Template Known Secondary structure 

SS


T
.SS

TT
TTS


S


TTTG
Template Predicted Secondary structure 
















.


















Template SS confidence 















































































   8990.........100.........110.........120 .........130.........140.........150.........160.......
 
   141........150......... 160.........170.........180. ........190.........200.....
Predicted Secondary structure  .......






......



..










Query SS confidence  . . . . . . .


















. . . . . .





















. .























Query Sequence  . . . . . . . MKRAEPGKNAIAHTVDRNG. . . . . . LWHALTPQFFPRELLHDCLTRA. . LNEGATITDEASALEYCGFHPQLV
Query Conservation  .......                   ......              
       ..        
        
  
  
Alig confidence  .......


















......





















..

















.




Template Conservation                   
     
             
 
         
                
  
    . 
   
Template Sequence  SKYGVIRGEWLEEGVYEIKDMVEKPNQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRTQAKRK. RIIAY
Template Known Secondary structure  GGSTTS

TTT
S
S
TTT



GGGS

S.

Template Predicted Secondary structure 






























.
Template SS confidence 















































































   168.170.........180.........190.........200.........210.........220.........230.........240. .....
 
   206...210.........220... ......230.
Predicted Secondary structure 






.
Query SS confidence 

















.







Query Sequence  EGRADNIKVTRPEDLALA. EFYLTRTI
Query Conservation         







  
.
 

    
Alig confidence 

















.







Template Conservation         

 
 

   
         
Template Sequence  QFKGKRYDCGSVEGYIEASNAYYKKRL
Template Known Secondary structure 

STTS
Template Predicted Secondary structure 







Template SS confidence 


























   247..250.........260.........270...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions