Job Description Q46893 Confidence 99.94% Date Thu Jan 5 12:35:35 GMT 2012 Rank 40 Aligned Residues 224 % Identity 14% Template c3jukA_ PDB info PDB header:transferase Chain: A: PDB Molecule:udp-glucose pyrophosphorylase (galu); PDBTitle: the crystal structure of udp-glucose pyrophosphorylase complexed with2 udp-glucose Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																			.	.	.																																																					.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.																																																					.	.	.	.	.	.	.	.
Query Sequence		L	D	V	C	A	V	V	P	A	A	G	F	G	R	R	M	Q	.	.	.	T	E	C	P	K	Q	Y	L	S	I	G	N	Q	T	I	L	E	H	S	V	H	A	L	L	A	H	P	R	V	K	R	V	V	I	A	I	S	P	G	D	S	R	F	A	Q	L	P	L	A	N	H	P	.	.	.	.	.	.	.	.
Query Conservation																			.	.	.																																																					.	.	.	.	.	.	.	.
Alig confidence																			.	.	.																																																					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	I	K	K	C	L	F	P	A	A	G	Y	G	T	R	F	L	P	I	T	K	T	I	P	K	E	M	L	P	I	V	D	K	P	L	I	Q	Y	A	V	E	E	A	M	E	A	G	C	E	V	M	A	I	V	T	G	R	N	K	R	S	L	E	D	Y	F	D	T	S	Y	T	N	K	E	N	A	L	K	S	I
Template Known Secondary structure												S			G	G	G	T	T	G	G	G	T	S		G	G	G		B	S	S	S	S	B													T										T	T								T	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
											75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																			.	.	.																																	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																			.	.	.																																	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	Q	I	T	V	V	D	G	G	D	E	R	A	D	S	V	L	A	G	L	K	A	A	G	D	A	Q	W	V	L	V	H	D	A	A	.	.	.	R	P	C	L	H	Q	D	D	L	A	R	L	L	A	L	S	E	T	S	R	T	G	G	I	L	A	A	P	V	R	D	T	.	.
Query Conservation		.	.	.	.	.	.	.	.	.																																			.	.	.																																	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																								.											.	.	.																																	.	.
Template Conservation																																		.
Template Sequence		R	N	I	I	E	K	C	C	F	S	Y	V	R	Q	K	Q	M	K	G	L	G	H	A	I	L	T	G	E	A	L	I	G	.	N	E	P	F	A	V	I	L	A	D	D	L	C	I	S	H	D	H	P	S	V	L	K	Q	M	T	S	L	Y	Q	K	Y	Q	C	S	I	V	A	I	E	E	V	A	L	E	E	V
Template Known Secondary structure																S	S											T						.	S	S							T	T						T	T	S																S										T	T	T	G
Template Predicted Secondary structure																																		.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
									141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																				.	.	.	.	.	.																							.	.
Query SS confidence		.	.	.	.	.	.	.																				.	.	.	.	.	.																							.	.
Query Sequence		.	.	.	.	.	.	.	M	K	R	A	E	P	G	K	N	A	I	A	H	T	V	D	R	N	G	.	.	.	.	.	.	L	W	H	A	L	T	P	Q	F	F	P	R	E	L	L	H	D	C	L	T	R	A	.	.	L	N	E	G	A	T	I	T	D	E	A	S	A	L	E	Y	C	G	F	H	P	Q	L	V
Query Conservation		.	.	.	.	.	.	.																				.	.	.	.	.	.																							.	.
Alig confidence		.	.	.	.	.	.	.																				.	.	.	.	.	.																							.	.																			.
Template Conservation																																																																												.
Template Sequence		S	K	Y	G	V	I	R	G	E	W	L	E	E	G	V	Y	E	I	K	D	M	V	E	K	P	N	Q	E	D	A	P	S	N	L	A	V	I	G	R	Y	I	L	T	P	D	I	F	E	I	L	S	E	T	K	P	G	K	N	N	E	I	Q	I	T	D	A	L	R	T	Q	A	K	R	K	.	R	I	I	A	Y
Template Known Secondary structure		G	G	S										T	T										S			T	T	T		S		S											T	T							T					G	G	G	S														S	.
Template Predicted Secondary structure																																																																												.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		E	G	R	A	D	N	I	K	V	T	R	P	E	D	L	A	L	A	.	E	F	Y	L	T	R	T	I
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		Q	F	K	G	K	R	Y	D	C	G	S	V	E	G	Y	I	E	A	S	N	A	Y	Y	K	K	R	L
Template Known Secondary structure					S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions