Job Description Q46893 Confidence 100.00% Date Thu Jan 5 12:35:35 GMT 2012 Rank 6 Aligned Residues 218 % Identity 22% Template c3f1cB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative 2-c-methyl-d-erythritol 4-phosphate PDBTitle: crystal structure of 2-c-methyl-d-erythritol 4-phosphate2 cytidylyltransferase from listeria monocytogenes Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																							.	.	.
Query SS confidence																																																							.	.	.
Query Sequence		V	C	A	V	V	P	A	A	G	F	G	R	R	M	Q	T	E	C	P	K	Q	Y	L	S	I	G	N	Q	T	I	L	E	H	S	V	H	A	L	L	A	H	P	R	V	K	R	V	V	I	A	I	S	P	.	.	.	G	D	S	R	F	A	Q	L	P	L	A	N	H	P	Q	I	T	V	V	D	G	G	D	E
Query Conservation																																																							.	.	.
Alig confidence																.	.	.	.																																				.	.	.
Template Conservation																.	.	.	.
Template Sequence		I	Y	A	Q	I	L	A	G	M	G	N	V	S	M	.	.	.	.	P	K	Q	F	L	P	L	N	G	K	P	I	I	V	H	T	V	E	K	F	I	L	N	T	R	F	D	K	I	L	I	S	S	P	K	E	W	M	N	H	A	E	D	N	I	K	K	Y	I	S	D	D	R	I	V	V	I	E	G	G	E	D
Template Known Secondary structure											T	T	T	S		.	.	.	.		G	G	G	S			T	T													T		T	T		S								G	G	G															T	T								S	S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.					.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		R	A	D	S	V	L	A	G	L	K	A	A	.	.	.	.	.	.	G	D	A	Q	W	V	L	V	H	D	A	A	R	P	C	L	H	Q	D	D	L	A	R	L	L	A	L	S	E	T	S	R	T	G	G	I	L	A	A	P	V	R	D	T	M	K	R	A	E	P	G	K	N	A	I	A	H	T	V	D	R	N
Query Conservation														.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																																											.	.
Template Conservation																																																														.	.
Template Sequence		R	N	E	T	I	M	N	G	I	R	F	V	E	K	T	Y	G	L	T	D	D	D	I	I	V	T	H	D	A	V	R	P	F	L	T	H	R	I	I	E	E	N	I	D	A	A	L	E	T	G	A	V	D	T	V	I	E	A	L	D	.	.	T	I	V	E	S	S	N	H	E	V	I	T	D	I	P	V	R	D
Template Known Secondary structure																	T				T	T								T	T		T	T																T	S									S	S	.	.				B		S	S	S	S	S			B				G	G
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		G	L	W	H	A	L	T	P	Q	F	F	P	R	E	L	L	H	D	C	L	T	R	A	L	N	E	G	.	A	T	I	T	D	E	A	S	A	L	E	Y	C	G	F	H	P	Q	L	V	E	G	R	A	D	N	I	K	V	T	R	P	E	D	L	A	L	A	E	F	Y	L	T	R	T	I
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		H	M	Y	Q	G	Q	T	P	Q	S	F	N	M	K	K	V	F	N	H	Y	Q	N	L	T	P	E	K	K	Q	I	L	T	D	A	C	K	I	C	L	L	A	G	D	D	V	K	L	V	K	G	E	I	F	N	I	K	I	T	T	P	Y	D	L	K	V	A	N	A	I	I	Q	E	R	I
Template Known Secondary structure		G																					T	S																			T										T	T						S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions