Job Description Q46893 Confidence 99.86% Date Thu Jan 5 12:35:35 GMT 2012 Rank 55 Aligned Residues 227 % Identity 16% Template c3brkX_ PDB info PDB header:transferase Chain: X: PDB Molecule:glucose-1-phosphate adenylyltransferase; PDBTitle: crystal structure of adp-glucose pyrophosphorylase from2 agrobacterium tumefaciens Resolution 2.10 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.										.	70	.	.	.
Predicted Secondary structure																		.	.	.															.																																	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.															.																																	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	C	A	V	V	P	A	A	G	F	G	R	R	M	Q	.	.	.	T	E	C	P	K	Q	Y	L	S	I	G	N	Q	T	.	I	L	E	H	S	V	H	A	L	L	A	H	P	R	V	K	R	V	V	I	A	I	S	P	G	D	S	R	F	A	Q	L	.	.	.	.	.	.	.	.	.	P	L	A	N	H
Query Conservation																		.	.	.															.																																	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.															.																																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	X	A	Y	V	L	A	G	G	R	G	S	R	L	K	E	L	T	D	R	R	A	K	P	A	V	Y	F	G	G	K	A	R	I	I	D	F	A	L	S	N	A	L	N	S	G	I	R	R	I	G	V	A	T	Q	Y	K	A	H	S	L	I	R	H	L	Q	R	G	W	D	F	F	R	P	E	R	N	E	S
Template Known Secondary structure		G												G	G	G	G	G	G	G	S	S	S		G	G	G	S			T	T	T			T											T	T										T	T												S					G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.							.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																										.	.																																							.	.	.	.	.	.
Query SS confidence																										.	.																																							.	.	.	.	.	.
Query Sequence		P	Q	I	T	V	V	D	G	G	D	E	R	A	D	S	V	L	A	G	L	K	A	A	G	.	.	D	A	Q	W	V	L	V	H	D	A	A	R	P	C	L	H	Q	D	D	L	A	R	L	L	A	L	S	E	T	S	R	T	G	G	I	L	A	A	.	.	.	.	.	.	P	V	R	D	T	M	K	R	A	E
Query Conservation																										.	.																																							.	.	.	.	.	.
Alig confidence																										.	.													.	.																									.	.	.	.	.	.
Template Conservation																																								.	.
Template Sequence		F	D	I	L	P	A	S	W	Y	E	G	T	A	D	A	V	Y	Q	N	I	D	I	I	E	P	Y	A	P	E	Y	X	V	I	L	A	G	D	H	.	.	I	Y	K	X	D	Y	E	Y	X	L	Q	Q	H	V	D	S	G	A	D	V	T	I	G	C	L	E	V	P	R	X	E	A	T	G	F	G	V	X	H	V
Template Known Secondary structure																			T	T										S							S	S		.	.				B		T										T	T		S										T	T	G	G	G	G	S
Template Predicted Secondary structure																																								.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.												160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Query Sequence		P	G	K	N	A	I	A	H	T	V	D	R	N	G	.	.	.	.	.	.	.	.	.	.	.	L	W	H	A	L	T	P	Q	F	F	P	R	E	L	L	H	D	C	L	T	R	A	L	N	E	G	A	T	I	T	D	E	A	.	.	.	.	S	A	L	E	Y	C	G	F	H	P	Q	L	V	E	G	R	A	D
Query Conservation																.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Template Conservation
Template Sequence		N	E	K	D	E	I	I	D	F	I	E	K	P	A	D	P	P	G	I	P	G	N	E	G	F	A	L	A	S	X	G	I	Y	V	F	H	T	K	F	L	X	E	A	V	R	R	D	A	A	D	I	I	P	Y	I	V	E	H	G	K	A	V	A	H	R	F	A	D	S	C	V	R	S	D	F	E	H	E	P	Y
Template Known Secondary structure			T	T	S	B							S		S	S				B	T	T	B	T	T																					T	S	S					T	T						S											B				T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	K	V	T	R	P	E	D	L	A	L	A	E	F	Y	L	T	R	T	I	H	Q	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	R	D	V	G	T	I	D	A	Y	W	Q	A	N	I	D	L	T	D	V	V	P	D	L	D
Template Known Secondary structure							S											T	T	S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions