Job Description Q46893 Confidence 100.00% Date Thu Jan 5 12:35:35 GMT 2012 Rank 2 Aligned Residues 221 % Identity 36% Template c2xwlB_ PDB info PDB header:transferase Chain: B: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase; PDBTitle: crystal structure of ispd from mycobacterium smegmatis in complex2 with ctp and mg Resolution 1.49 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	A	V	V	P	A	A	G	F	G	R	R	M	Q	T	E	C	P	K	Q	Y	L	S	I	G	N	Q	T	I	L	E	H	S	V	H	A	L	L	A	H	P	R	V	K	R	V	V	I	A	I	S	P	G	D	S	R	F	A	Q	L	P	L	A	N	H	P	Q	I	T	V	V	D	G	G	D	E	R	A	D
Query Conservation
Alig confidence																																																																													.
Template Conservation																																																																													.
Template Sequence		T	V	A	V	V	P	A	A	G	S	G	E	R	L	R	A	G	R	P	K	A	F	V	T	L	G	G	T	P	L	L	E	H	A	L	S	G	L	R	A	S	G	V	I	D	R	I	V	I	A	V	P	P	A	L	T	D	E	S	K	L	V	F	G	G	E	D	S	V	I	V	S	G	G	V	.	D	R	T	E
Template Known Secondary structure													T	T	T	T	S	S	S		G	G	G	S			T	T														T	S											G	G	G										B	T	T								S	.	S
Template Predicted Secondary structure																																																																													.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	L	A	G	L	K	A	A	G	D	A	Q	W	V	L	V	H	D	A	A	R	P	C	L	H	Q	D	D	L	A	R	L	L	A	L	S	E	T	S	R	T	G	G	I	L	A	A	P	V	R	D	T	M	K	R	A	E	P	G	K	N	A	I	A	H	T	V	D	R	N	G	L	W	H	A	L	T	P	Q
Query Conservation
Alig confidence																																																																.
Template Conservation																																																																.
Template Sequence		S	V	A	L	A	L	E	A	A	G	D	A	E	F	V	L	V	H	D	A	A	R	A	L	T	P	P	A	L	I	A	R	V	V	A	A	L	K	E	G	H	S	A	V	V	P	G	L	A	P	A	D	T	I	K	A	V	D	A	N	G	A	.	V	L	G	T	P	E	R	A	G	L	R	A	V	Q	T	P	Q
Template Known Secondary structure								T	T	S		S		S							T	T		T	T																T		S									S	S							T	T	S		.							G	G	G						S
Template Predicted Secondary structure																																																																.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	P	R	E	L	L	H	D	C	L	T	R	A	L	N	E	G	A	T	I	T	D	E	A	S	A	L	E	Y	C	G	F	H	P	Q	L	V	E	G	R	A	D	N	I	K	V	T	R	P	E	D	L	A	L	A	E	F	Y	L	T	R	T	I	H
Query Conservation
Alig confidence																					.	.
Template Conservation																					.	.
Template Sequence		G	F	H	A	D	V	L	R	R	A	Y	A	R	A	T	A	G	G	V	.	.	T	D	D	A	S	L	V	E	Q	L	G	T	P	V	Q	I	V	D	G	D	P	L	A	F	K	I	T	T	P	L	D	L	V	L	A	E	A	V	L	A	H	H	H	H
Template Known Secondary structure													T	T			S	S	S		.	.									T	T	T										G	G	G					S
Template Predicted Secondary structure																					.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions