Job Description Q46893 Confidence 92.10% Date Thu Jan 5 12:35:35 GMT 2012 Rank 76 Aligned Residues 105 % Identity 19% Template c2ffuA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 2; PDBTitle: crystal structure of human ppgalnact-2 complexed with udp2 and ea2 Resolution 1.64 Å

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		29	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure											.	.																.	.	.								.	.
Query SS confidence											.	.																.	.	.								.	.
Query Sequence		Y	L	S	I	G	N	Q	T	I	.	.	L	E	H	S	V	H	A	L	L	A	H	P	R	V	K	.	.	.	R	V	V	I	A	I	S	.	.	P	G	D	S	R	F	A	Q	L	P	L	A	N	H	P	Q	I	T	V	V	D	G	G	D	E	R	A	D	S	V	L	A	G	L	K	A	A	G	D	A	Q	W
Query Conservation											.	.																.	.	.								.	.
Alig confidence											.	.																.	.	.								.	.																																							.
Template Conservation																																																																														.
Template Sequence		V	I	T	F	H	N	E	A	R	S	A	L	L	R	T	V	V	S	V	L	K	K	S	P	P	H	L	I	K	E	I	I	L	V	D	D	Y	S	N	D	P	E	D	G	A	L	L	G	K	I	E	K	V	R	V	L	R	N	D	R	R	E	G	L	M	R	S	R	V	R	G	A	D	A	A	Q	.	A	K	V
Template Known Secondary structure						S	S																	S		G	G	G										S		S		T					G	G	G	G	B	T	T							S	S																	.	S	S
Template Predicted Secondary structure																																																																														.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	V	H	D	A	A	R	P	C	L	H	Q	D	D	L	A	R	L	L	A	L	S	E	T	S	R	T	G	G	I	L	A	A
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		L	T	F	L	D	S	H	C	.	E	C	N	E	H	W	L	E	P	L	L	E	R	V	A	E	D	R	T	R	V	V	S	P	I
Template Known Secondary structure							S	S		.				T	T													T	T
Template Predicted Secondary structure										.
Template SS confidence
		220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions