Job Description Q46893 Confidence 99.84% Date Thu Jan 5 12:35:35 GMT 2012 Rank 56 Aligned Residues 172 % Identity 16% Template c2e8bA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:probable molybdopterin-guanine dinucleotide biosynthesis PDBTitle: crystal structure of the putative protein (aq1419) from aquifex2 aeolicus vf5 Resolution 1.61 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	D	V	C	A	V	V	P	A	A	G	F	G	R	R	M	Q	T	E	C	P	K	Q	Y	L	S	I	G	N	Q	T	I	L	E	H	S	V	H	A	L	L	A	H	P	R	V	K	R	V	V	I	A	I	S	P	G	D	S	R	F	A	Q	L	P	L	A	N	H	P	Q	I	T	V	V	D	G	G	D	E
Query Conservation
Alig confidence																					.	.																																				.	.	.	.	.	.
Template Conservation																					.	.																																				.	.	.	.	.	.
Template Sequence		S	K	V	N	T	C	Y	V	L	A	G	G	K	S	K	R	F	G	E	.	.	D	K	L	L	Y	E	I	K	G	K	K	V	I	E	R	V	Y	E	T	A	K	S	V	F	K	E	V	Y	I	V	A	K	D	R	E	.	.	.	.	.	.	K	F	S	F	L	N	A	P	V	V	L	D	E	F	E	E	S	A
Template Known Secondary structure			S										S	S					S	T	.	.	T																					T	T		S							S		S	G	.	.	.	.	.	.	G	G	G	G	G	T									S	S
Template Predicted Secondary structure																					.	.																																				.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	D	S	V	L	A	G	L	K	A	A	G	D	A	Q	W	V	L	V	H	D	A	A	R	P	C	L	H	Q	D	D	L	A	R	L	L	A	L	S	E	T	S	R	T	G	G	I	L	A	A	P	V	R	D	T	M	K	R	A	E	P	G	K	N	A	I	A	H	T	V	D	R	N	G	L	W	H	A	L
Query Conservation
Alig confidence																.																												.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.																												.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	I	G	L	Y	T	A	L	K	H	A	K	E	.	E	N	V	F	V	L	S	G	D	L	P	L	M	K	K	E	T	V	L	Y	V	L	E	N	F	K	E	.	.	.	P	V	S	V	A	K	T	E	K	L	H	T	L	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														S	S	.	S							T	T		T	T												T			S	.	.	.	S						S	S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.																												.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210					.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		T	P	Q	F	F	P	R	E	L	L	H	D	C	L	T	R	A	L	N	E	G	A	T	I	T	D	E	A	S	A	L	E	Y	C	G	F	H	P	Q	L	V	E	G	R	A	D	.	.	.	.	N	I	K	V	T	R
Query Conservation																																																.	.	.	.
Alig confidence		.	.	.																													.	.	.	.	.											.	.	.	.
Template Conservation		.	.	.																													.	.	.	.	.
Template Sequence		.	.	.	V	Y	S	K	K	L	L	E	K	I	E	E	R	I	K	K	G	D	Y	R	I	W	A	L	L	K	D	V	.	.	.	.	.	G	Y	N	E	V	E	I	P	E	E	L	R	Y	T	L	L	N	M	N	T
Template Known Secondary structure		.	.	.				G	G	G										T	T												.	.	.	.	.									G	G	G	G	G	G	G			S
Template Predicted Secondary structure		.	.	.																													.	.	.	.	.
Template SS confidence
					140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions