Job Description Q46893 Confidence 89.13% Date Thu Jan 5 12:35:35 GMT 2012 Rank 77 Aligned Residues 105 % Identity 16% Template c1xhbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 1; PDBTitle: the crystal structure of udp-galnac: polypeptide alpha-n-2 acetylgalactosaminyltransferase-t1 Resolution 2.50 Å

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		29	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.								60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure										.	.																	.	.	.								.	.	.	.	.	.	.
Query SS confidence										.	.																	.	.	.								.	.	.	.	.	.	.
Query Sequence		Y	L	S	I	G	N	Q	T	.	.	I	L	E	H	S	V	H	A	L	L	A	H	P	R	V	K	.	.	.	R	V	V	I	A	I	S	.	.	.	.	.	.	.	P	G	D	S	R	F	A	Q	L	P	L	A	N	H	P	Q	I	T	V	V	D	G	G	D	E	R	A	D	S	V	L	A	G	L	K	A	A
Query Conservation										.	.																	.	.	.								.	.	.	.	.	.	.
Alig confidence										.	.																	.	.	.								.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	V	F	H	N	E	A	W	S	T	L	L	R	T	V	H	S	V	I	N	R	S	P	R	H	M	I	E	E	I	V	L	V	D	D	A	S	E	R	D	F	L	K	R	P	L	E	S	Y	V	K	K	L	K	V	P	V	H	V	I	R	M	E	Q	R	S	G	L	I	R	A	R	L	K	G	A	A	V	S
Template Known Secondary structure						S	S																S	S		G	G	G										S				G	G	G	T									S	S	S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	A	Q	W	V	L	V	H	D	A	A	R	P	C	L	H	Q	D	D	L	A	R	L	L	A	L	S	E	T	S	R	T	G	G	I	L	A	A
Query Conservation
Alig confidence			.												.
Template Conservation			.												.
Template Sequence		R	.	G	Q	V	I	T	F	L	D	A	H	C	.	E	C	T	A	G	W	L	E	P	L	L	A	R	I	K	H	D	R	R	T	V	V	C	P	I
Template Known Secondary structure			.	S	S							S	S		.				T	T													T	T
Template Predicted Secondary structure			.												.
Template SS confidence
		201		.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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