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Job DescriptionP77337
Confidence99.53%DateThu Jan 5 12:27:58 GMT 2012
Rank56Aligned Residues219
% Identity21%Templated2gqfa1
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain HI0933 N-terminal domain-like
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50. ........60......
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Query Sequence  DKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLY. . . . . . . . . . . . . . . . . AHTLEAIIPGFAVSA
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Template Sequence  QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILXSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD
Template Known Secondary structure 
S

STT


SSSSS
GGGGT


SS

GGG
S
TTSTS
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   67..70.........80.........90.........100.........110.........120.........130.........140...
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Query Sequence  PVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTG. . .
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Template Sequence  FISLVAEQGITYHEKELGQLFCDEG. . . . . . . . . . . . . . . AEQIVEXLKSECDKYGAKILLRSEVSQVERIQNDEKVRFV
Template Known Secondary structure  TT


STTTT
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S



S
SS

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   83......90.........100....... ..110.........120.........130.........140.......
 
   144.....150.........160.... .....170.........180.........190.........200.........210..
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Query Sequence  VQAGDDILEANVVILADGVNS. . . . . . . . . . . MLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLF
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Template Sequence  LQVNSTQWQCKNLIVATGGLSXPGLGATPFGYQIAEQFGIPVIPPRA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTS



SS
GGGT

STT


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   148.150.........160.........170.........180.........190....
 
   213......220.........230.........240.........250.........260.........270.........280.........290..
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Query Sequence  AGSPSDGLMGGGFLYTNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VTXGGVDTKVISSKTXESN
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GGGB
TTT
BBS
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   343......350.........360.
 
   293......300.........310.........320.........330...
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Query Sequence  VNEGVMIVGDAAGFCLNLGFTVRGMDLAIASAQAAATTVIA
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Template Sequence  QVSGLYFIGEVLDVTGWLG. . GYNFQWAWSSAYACALSISR
Template Known Secondary structure  SSTT
GGGBS

TT..TT
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   362.......370.........380 .........390.........400
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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