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Job DescriptionP77337
Confidence99.53%DateThu Jan 5 12:27:58 GMT 2012
Rank57Aligned Residues273
% Identity19%Templated1kf6a2
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20........ .30.........40...... ...50...
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Query Sequence  MSDDKFDAIVVGAGVAGSVAALVMARAG. . LDVLVIERGDSAGCKNMT. . . . . . . . . . . . . . . . . . . . . . . . . GGRLYAH
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Template Sequence  MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQ
Template Known Secondary structure 

S

S
TT

SS
GGGSGGGG

S



STT

TTT
S
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   0.........10.........20.........30.........40.........50.........60.........70.........
 
   54.....60.........70.........80.........90.........100.........110.........120.........130...
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Query Sequence  TLEAIIPGFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDA
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Template Sequence  DVVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLD
Template Known Secondary structure  TT



B
TTSSB

B

TT
SS


STT
TT
TTT
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   80.........90.........100.........110.........120.........130.........140.........150.........
 
   134.....140.........150 .........160.........170.........180.........190.........200.......
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Query Sequence  LVREGNKVTGVQAGDDI. . . . . . LEANVVILADGVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEG
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Template Sequence  ILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTG. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTTTTT
S





GGGSSS
SS
TT
S
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   160.........170.........180.........190.........200.........210
 
   208.210.........220.........230.........240.........250.........260.........270.........280.......
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Query Sequence  AAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DGMGMALSHGVPLRDMGGIETD
Template Known Secondary structure  ..........................................................TTT






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   211........220.........230..
 
   288.290.........300...... ...310.........320.........330.........340.........350.........360..
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Query Sequence  MVPQLVNEGVMIVGDAAGF. . . . CLNLGFTVRGMDLAIASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRDMQ
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Template Sequence  QNCETRIKGLFAVGECSSVGLHGANRLG. . SNSLAELVVFGRLAGEQATERAATAGNGNEAAIEAQAAGVEQRLKDLVN
Template Known Secondary structure  TTSB
SSBT
GGG
SSSTTS

T..TS




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   365....370.........380.........390.. .......400.........410.........420.........430.........440.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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