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Job DescriptionP77337
Confidence100.00%DateThu Jan 5 12:27:58 GMT 2012
Rank3Aligned Residues363
% Identity17%Templatec3e1tA_
PDB info PDB header:flavoproteinChain: A: PDB Molecule:halogenase; PDBTitle: structure and action of the myxobacterial chondrochloren2 halogenase cndh, a new variant of fad-dependent halogenases
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70...... ...80
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Query Sequence  DDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVERKVTREK. . ISFL
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Template Sequence  PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIG. ESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRW
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STTT


SS
SS


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   5....10.........20.........30.........40....... ..50.........60.........70.........80...
 
   81........90.........100.........110.........120.........130.........140 .........150.....
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Query Sequence  TEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNK. . . . . VTGVQAGDDILEANV
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Template Sequence  GKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARF
Template Known Secondary structure  SS
SS
SSSSSSSTT

B

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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   156...160.........170.........180.........190.........200.........210.........220.........230.....
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Query Sequence  VILADGVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISL
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Template Sequence  IVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQ. . . . . . . . . . . DGWFWYIPLSDTLTSV
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TT
SSGGGT


STT
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STT
TTST...........T
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   164.....170.........180.........190.........200.........210...... ...220.........230..
 
   236...240.........250.........260 .........270. ........280.........290.........300.........310.
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Query Sequence  GLVCGLGDIAHAQKSVPQMLEDFKQ. HPAIRPLISGG. . . KLLEYSAHMVPEGGLAMVPQLVNEGVMIVGDAAGFCLNLG
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Template Sequence  GAVVSREAAEAIKDGHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDP. .
Template Known Secondary structure  TTTSS
TSTT


SSTTSS
S

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   233......240.........250.........260.........270.........280.........290.........300.........310
 
   312.......320.........330.........340.........350.........360.........370.........
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Query Sequence  FTVRGMDLAIASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQ
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Template Sequence  VFSSGVHLATYSALLVARAINTCLAGEMSEQRCFEEFERRYRREYGNFYQFLVAFYDMNQDTDSYFWS
Template Known Secondary structure  TT

TTT
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TT
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   311........320.........330.........340.........350.........360.........370........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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