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Job DescriptionP77337
Confidence99.73%DateThu Jan 5 12:27:58 GMT 2012
Rank37Aligned Residues316
% Identity17%Templatec3dmeB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:conserved exported protein; PDBTitle: crystal structure of conserved exported protein from2 bordetella pertussis. northeast structural genomics target3 ber141
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40 .........50..
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Query Sequence  DKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSA. . GCKNMTGGRLYA. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  TDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARG
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   53......60.........70.........80.........90.........100.........110.........120
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Query Sequence  . . . . . . . . . . . . HTLEAIIPGFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ
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Template Sequence  VPHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAES
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
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Query Sequence  AGAQFIPGVRVDALVREGN. . . KVTGVQAGDDILEANVVILADGVNS. MLGRSLGMVPASDPHHYAVGVKEVIGLTPEQI
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Template Sequence  DGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIPRDSIPPEYLCKGSYFTLAGRAP
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   197..200.........210.........220.........230.........240.........250.........260.........270......
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Query Sequence  NDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEY
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Template Sequence  FSR. . . . . . . . . . . LIYPVPQHAGLGVHLTLDLGGQAKFGPDTEWIATEDYTLDPRRADVFYAAVRSYWPALPDGALAPG
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   277..280.........290.........300. ........310.........320.........330..
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Query Sequence  SAHMVPEGGLAMVPQLVNEGVMIVG. . . DAAGFCLNLGFTVRGMDLAIASAQAAATTVI
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Template Sequence  YTGIRP. . KISGPHEPAADFAIAGPASHGVAGLVNLYGIESPGLTASLAIAEETLARLA
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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