Job Description P77337 Confidence 99.58% Date Thu Jan 5 12:27:58 GMT 2012 Rank 46 Aligned Residues 320 % Identity 16% Template c3djeA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:fructosyl amine: oxygen oxidoreductase; PDBTitle: crystal structure of the deglycating enzyme fructosamine2 oxidase from aspergillus fumigatus (amadoriase ii) in3 complex with fsa Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.															.	.	.	.	.	60	.	.
Predicted Secondary structure																															.												.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.												.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	D	D	K	F	D	A	I	V	V	G	A	G	V	A	G	S	V	A	A	L	V	M	A	R	A	G	L	.	D	V	L	V	I	E	R	G	D	S	A	.	.	.	G	C	K	N	M	T	G	G	R	L	Y	A	H	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	A	I	I	P	G	F
Query Conservation																															.												.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																									.												.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.
Template Sequence		V	T	K	S	.	S	S	L	L	I	V	G	A	G	T	W	G	T	S	T	A	L	H	L	A	R	R	G	Y	T	N	V	T	V	L	D	P	Y	P	V	P	S	A	I	S	A	G	N	D	V	N	K	V	I	S	S	G	Q	Y	S	N	N	K	D	E	I	E	V	N	E	I	L	A	E	E	A	F	N	G	W
Template Known Secondary structure				T	T	.	S								S													T	T									S	S		S	S		T	T		T	T		S	S									S
Template Predicted Secondary structure						.
Template SS confidence
		3	.	.	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80																																			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	S	A	P	V	E	R	K	V	T	R	E	K	I	S	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	E	S	A	V	T	L	D	F	H	R	E	Q	P	D	V	P	Q	H	A	S	Y	T	V	L	R	N
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	N	D	P	L	F	K	P	Y	Y	H	D	T	G	L	L	X	S	A	C	S	Q	E	G	L	D	R	L	G	V	R	V	R	P	G	E	D	P	N	L	V	E	L	T	R	P	E	Q	F	R	K	L	A	P	E	G	V	L	Q	G	D	F	P	G	W	K	G	Y	F	A	R	S	G	A	G	W	A	H	A	R
Template Known Secondary structure					T	T	T	G	G	G												S													G	G	G		T	T						S						T	T	S		T	T	T	S		S			T	T							S	S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																							.	.	.																					.
Query SS confidence																							.	.	.																					.
Query Sequence		R	L	D	P	W	L	M	E	Q	A	E	Q	A	G	A	Q	F	I	P	G	V	.	.	.	R	V	D	A	L	V	R	E	G	N	K	V	T	G	V	Q	A	G	D	D	.	I	L	E	A	N	V	V	I	L	A	D	G	V	N	S	M	L	G	R	S	L	G	M	V	P	A	S	D	P	H	H	Y	A	V	G
Query Conservation																							.	.	.																					.
Alig confidence																							.	.	.																					.																.	.
Template Conservation																																																														.	.
Template Sequence		N	A	L	V	A	A	A	R	E	A	Q	R	X	G	V	K	F	V	T	G	T	P	Q	G	R	V	V	T	L	I	F	E	N	N	D	V	K	G	A	V	T	A	D	G	K	I	W	R	A	E	R	T	F	L	C	A	G	A	S	A	.	.	G	Q	F	L	D	F	K	N	Q	L	R	P	T	A	W	T	L	V
Template Known Secondary structure														T	T						S	T	T	T	T									T	T								T	T	T						S							G	G	G	G	.	.	G	G	T	S			T	T
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		V	K	E	V	I	G	L	T	P	E	Q	I	N	D	R	F	N	I	T	G	E	E	G	A	A	W	L	F	A	G	S	P	S	D	G	L	M	G	G	G	F	L	Y	T	N	K	D	S	I	S	L	G	L	V	C	G	L	G	D	I	A	H	A	Q	K	S	V	P	Q	M	L	E	D	F	K	Q	.	H	P	A
Query Conservation																																																																														.
Alig confidence																																																																														.
Template Conservation
Template Sequence		H	I	A	L	K	P	E	E	R	A	L	Y	K	N	I	P	V	I	F	N	I	E	R	G	F	F	F	E	P	D	E	E	R	G	E	I	K	I	C	D	E	H	P	G	Y	T	N	X	V	Q	S	A	D	G	T	X	X	S	I	P	F	E	K	T	Q	I	P	K	E	A	E	T	R	V	R	A	L	L	K	E
Template Known Secondary structure							G	G	G					T	T							T	T	T					S			T	T	T										S									T	T											S	S		B
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		I	R	P	L	I	S	G	G	K	L	L	E	Y	S	A	H	M	V	P	E	G	G	L	A	M	V	P	Q	L	V	N	E	G	V	M	I	V	G	.	.	.	D	A	A	G	F	C	L	N	L	G	F	T	V	R	G	M	D	L	A	I	A	S	A	Q	A	A	A	T	T	V	I
Query Conservation																																								.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.
Template Sequence		T	X	P	Q	L	A	D	R	P	F	S	F	A	R	I	C	W	C	A	D	.	.	.	.	.	.	.	.	.	T	A	N	R	E	F	L	I	D	R	H	P	Q	Y	H	S	L	V	L	G	C	G	A	S	G	R	G	F	K	Y	L	P	S	I	G	N	L	I	V	D	A	X	E
Template Known Secondary structure				G	G	G	T	T				S										.	.	.	.	.	.	.	.	.		T	T	S								S	S		T	T								T	T			G	G	G	T	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.										340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions