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Job DescriptionP77337
Confidence99.38%DateThu Jan 5 12:27:58 GMT 2012
Rank79Aligned Residues302
% Identity12%Templatec3ctyA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of t. acidophilum thioredoxin reductase
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  DDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVERKVTREKISFLTE
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Template Sequence  ERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREGVE
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STT

SSSTTGGGGG
S
B

BTTBSSB
TTST

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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  ESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADGV
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Template Sequence  VRSIKKTQGGFDIETNDDTYHAKYVIITT. . . . . . . . . GTTHKHLGVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIGGG
Template Known Secondary structure  TTSSS

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BTTTTTBTTTS
GGGGBTS

S
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   94.....100.........110.........120.. .......130.........140.........150.........160....
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  NSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCGLG
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Template Sequence  NSGAIAAISMSEYVKNVTIIEYMPKYMCENAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGV
Template Known Secondary structure  TTTBS
SSSS

S
TT


SSSSSTTT



S
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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   243......250.........260.........270.........280.........290.........300.........310.........320..
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Query Sequence  DIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNEGVMIVGDAAGFCLNLGFTVRGMDLAIA
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Template Sequence  FIYV. . . . . . . . . . . . . GLIPQTSFLKDSGVKLDERGYIVV. . . DSRQRTSVPGVYAAGDVTSGNFAQ. . . . . . IASAVG
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GGGTTS


B
TTS
B

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TT
B
SSTT
STTBTT



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   245... .250.........260.........270.. .......280.........290...... ...300..
 
   323......330.....
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Query Sequence  SAQAAATTVIAAK
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Template Sequence  DGCKAALSLYSDS
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   303......310.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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