Job Description P77337 Confidence 99.75% Date Thu Jan 5 12:27:58 GMT 2012 Rank 32 Aligned Residues 324 % Identity 17% Template c3bhkA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:monomeric sarcosine oxidase; PDBTitle: crystal structure of r49k mutant of monomeric sarcosine oxidase2 crystallized in phosphate as precipitant Resolution 1.71 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.													.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	F	D	A	I	V	V	G	A	G	V	A	G	S	V	A	A	L	V	M	A	R	A	G	L	D	V	L	V	I	E	R	G	D	S	A	G	.	.	.	C	K	N	M	T	G	G	R	L	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	H	T	L	E	A	I	I	P	G	F	A	V	S	A	P	V
Query Conservation																																								.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	H	F	D	V	I	V	V	G	A	G	S	M	G	M	A	A	G	Y	Q	L	A	K	Q	G	V	K	T	L	L	V	D	A	F	D	P	P	H	T	N	G	S	H	H	G	D	T	K	I	I	R	H	A	Y	G	E	G	R	E	Y	V	P	L	A	L	R	S	Q	E	L	W	Y	E	L	E	K	E	T	H	H
Template Known Secondary structure												S													T	T								S	S		S	S		S	S	S	S	S		S	S						S	S		T	T		G	G	G																			S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.																														.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	R	K	V	T	R	E	K	I	S	F	L	T	E	E	S	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	D	F	H	R	E	Q	P	D	V	P	Q	H	A	S	Y	T	V	L	R	N	R	L	D	P	W	L	M	E	Q	A	E
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	F	T	K	T	G	V	L	V	F	G	P	K	G	E	S	A	F	V	A	E	T	M	E	A	A	K	E	H	S	L	T	V	D	L	L	E	G	D	E	I	N	K	R	W	P	G	I	T	V	P	E	N	Y	N	A	I	F	E	P	N	S	G	V	L	F	S	E	N	C	I	R	A	Y	R	E	L	A	E
Template Known Secondary structure															T	T	S														T	T								T							S	T	T					T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	G	A	Q	F	I	P	G	V	R	V	D	A	L	V	R	E	G	N	K	V	T	G	V	Q	A	G	D	D	I	L	E	A	N	V	V	I	L	A	D	G	V	N	S	M	L	G	R	S	L	G	M	V	P	A	S	D	P	H	H	Y	A	V	G	V	K	E	V	I	G	L	T	P	E	Q	I	N	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	G	A	K	V	L	T	H	T	R	V	E	D	F	D	I	S	P	D	S	V	K	I	E	T	A	N	G	S	Y	T	A	D	K	L	I	V	S	M	G	A	W	N	S	K	L	L	S	K	L	N	L	D	I	P	L	Q	P	Y	R	Q	V	V	G	F	F	E	S	D	E	S	K	Y	S	N	D	I	D	F
Template Known Secondary structure			T	T						S										T	T							T	T													G	G	G					G	G	G	G	T																							B	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	I	T	G	E	E	G	A	A	W	L	F	A	G	S	P	S	D	G	L	M	G	G	G	F	L	Y	T	N	K	D	S	I	S	L	G	L	V	C	G	L	G	D	I	A	H	A	Q	K	S	V	P	Q	M	L	E	D	F	K	Q	H	P	A	I	R	P	L	I	S	G	G	K	L	L	E	Y	S	A	H
Query Conservation
Alig confidence																																	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.
Template Sequence		P	G	F	M	V	E	V	P	N	G	I	Y	Y	G	F	P	S	F	G	G	C	G	L	K	L	G	Y	H	T	F	G	.	.	.	.	.	.	Q	K	I	D	P	D	T	I	N	R	E	F	G	V	Y	P	E	D	E	S	N	L	R	A	F	L	E	E	Y	M	P	G	A	N	G	E	L	K	R	G	A	V	C
Template Known Secondary structure									T	T								B	S	T	T								S	S			.	.	.	.	.	.					T	T	T					T	T	S	S																G	G	G
Template Predicted Secondary structure																																	.	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.							.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		M	V	P	E	G	G	L	A	M	V	P	Q	L	V	N	E	G	V	M	I	V	G	.	.	.	D	A	A	G	F	C	L	N	L	G	F	T	V	R	G	M	D	L	A	I	A	S	A	Q	A	A	A	T	T	V	I	A	A	K	E	R	A	D	F	S	A
Query Conservation																								.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.
Template Sequence		M	Y	T	K	.	.	.	.	.	.	.	.	.	T	L	D	E	H	F	I	I	D	L	H	P	E	H	S	N	V	V	I	A	A	G	F	S	G	H	G	F	K	F	S	S	G	V	G	E	V	L	S	Q	L	A	L	T	G	K	T	E	H	D	I	S	I
Template Known Secondary structure						.	.	.	.	.	.	.	.	.		T	T	S								T	T											T	T			G	G	G															S			S	S			G	G
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.
Template SS confidence
		316	.	.	.										320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions