Job Description P77337 Confidence 99.38% Date Thu Jan 5 12:27:58 GMT 2012 Rank 78 Aligned Residues 154 % Identity 16% Template c2zxiC_ PDB info PDB header:fad-binding protein Chain: C: PDB Molecule:trna uridine 5-carboxymethylaminomethyl PDBTitle: structure of aquifex aeolicus gida in the form ii crystal Resolution 2.30 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	F	D	A	I	V	V	G	A	G	V	A	G	S	V	A	A	L	V	M	A	R	A	G	L	D	V	L	V	I	E	R	G	D	S	A	G	C	K	N	M	T	G	G	R	L	Y	A	H	T	L	E	A	I	I	P	G	F	A	V	S	A	P	V	E	R	K	V	T	R	E	K	I	S	F	L	T	E	E
Query Conservation
Alig confidence																																																																															.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		D	E	F	D	V	V	V	I	G	G	G	H	A	G	I	E	A	A	L	A	A	A	R	M	G	A	K	T	A	M	F	V	L	N	A	D	T	I	G	Q	M	S	C	N	P	A	I	G	G	I	A	K	G	I	V	V	R	E	I	D	A	L	G	G	E	M	G	K	A	I	D	Q	T	G	I	Q	F	.	.	.
Template Known Secondary structure		G			S						S	S													T	T								S		G	G	G	T	T				S		S					T	T												T		S													.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		S	A	V	T	L	D	F	H	R	E	Q	P	D	V	P	Q	H	A	S	Y	T	V	L	R	N	R	L	D	P	W	L	M	E	Q	A	E	Q	A	G	A	Q	F	I	P	G	V	R	V	D	A	L	V	R	E	G	N	K	V	T	.	G	V	Q	A	G	D	D	I	L	E	A	N	V	V	I	L	A	D	G	V
Query Conservation																																																													.
Alig confidence		.	.	.	.																																																								.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	K	M	L	N	T	R	K	G	K	A	V	Q	S	P	R	A	Q	A	D	K	K	R	Y	R	E	Y	M	K	K	V	C	E	N	Q	E	N	L	Y	I	K	Q	E	E	V	V	D	I	I	V	K	N	N	Q	V	V	G	V	R	T	N	L	G	V	E	Y	K	T	K	A	V	V	V	T	T	G	T
Template Known Secondary structure		.	.	.	.				S	T	T	S		G	G	G																							S	T	T						S								S	S	S	B							T	T	S						S							T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		163	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L
Template Known Secondary structure			B
Template Predicted Secondary structure
Template SS confidence
		159	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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