Job Description P77337 Confidence 99.30% Date Thu Jan 5 12:27:58 GMT 2012 Rank 95 Aligned Residues 298 % Identity 16% Template c2a87A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of m. tuberculosis thioredoxin reductase Resolution 3.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.										50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.
Query Sequence		F	D	A	I	V	V	G	A	G	V	A	G	S	V	A	A	L	V	M	A	R	A	G	L	D	V	L	V	I	E	R	G	D	S	A	G	C	K	N	M	T	G	G	R	.	.	.	.	.	.	.	.	.	L	Y	A	H	T	L	E	A	I	I	P	G	F	A	V	S	A	P	V	E	R	K	V	T	R	E	K
Query Conservation																																														.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	D	V	I	V	I	G	S	G	P	A	G	Y	T	A	A	L	Y	A	A	R	A	Q	L	A	P	L	V	F	E	G	T	S	F	G	G	A	L	M	T	T	T	D	V	E	N	Y	P	G	F	R	N	G	I	T	G	P	E	L	M	D	E	M	R	E	Q	A	L	R	F	G	A	D	L	R	M	E	D	V	E
Template Known Secondary structure																							T	T									S	S		S		G	G	G	S		S		B			S	T	T		T	T		B																T	T
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	F	L	T	E	E	S	A	V	T	L	D	F	H	R	E	Q	P	D	V	P	Q	H	A	S	Y	T	V	L	R	N	R	L	D	P	W	L	M	E	Q	A	E	Q	A	G	A	Q	F	I	P	G	V	R	V	D	A	L	V	R	E	G	N	K	V	T	G	V	Q	A	G	D	D	I	L	E	A	N	V	V
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	V	S	L	H	G	P	L	K	S	V	V	T	A	D	G	Q	T	H	R	A	R	A	V	I	L	A	M	G	A	A	A	R	Y	L	Q	V	P	G	E	Q	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	R	G	V	S	S	C	A	T	C	D	G	F	F	F	R	D	Q	D	I
Template Known Secondary structure						S	S	S	S						T	T	S																						T					T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	T	T	T			S						G	G	G	G	T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	A	D	G	V	N	S	M	L	G	R	S	L	G	M	V	P	A	S	D	P	H	H	Y	A	V	G	V	K	E	V	I	G	L	T	P	E	Q	I	N	D	R	F	N	I	T	G	E	E	G	A	A	W	L	F	A	G	S	P	S	D	G	L	M	G	G	G	F	L	Y	T	N	K	D	S	I	S	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	I	G	G	G	D	S	A	M	E	E	A	T	F	L	T	R	F	A	R	S	V	T	L	V	H	R	R	D	E	F	R	A	S	K	I	M	L	D	R	A	R	N	N	D	K	I	R	F	L	T	N	H	T	V	V	A	V	D	G	D	T	T	V	T	G	L	R	V	R	D	T	N	T	G	A	E	T	T
Template Known Secondary structure						S	S											T	T	T		S							S	S	S	S		S	S		T	T									T	T						S									S	S	S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	C	G	L	G	D	I	A	H	A	Q	K	S	V	P	Q	M	L	E	D	F	K	Q	H	P	A	I	R	P	L	I	S	G	G	K	L	L	E	Y	S	A	H	M	V	P	E	G	G	L	A	M	V	P	Q	L	V	N	E	G	V	M	I	V	G	D	A	A	G	F	C	L	N	L	G	F	T	V	R	G
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																									.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																									.	.	.	.	.	.
Template Sequence		L	P	V	T	G	V	F	V	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	E	P	R	S	G	L	V	R	E	A	I	D	V	D	P	D	G	Y	V	L	V	Q	.	.	.	G	R	T	T	S	T	S	L	P	G	V	F	A	A	G	D	L	V	D	R	T	Y	R	Q	.	.	.	.	.	.
Template Known Secondary structure					S						S	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T	B	T	T	B		B		T	T	S		B			S	.	.	.	T	T	S	S	B		S	S	T	T					G	G	G	T			S				.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																									.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.														.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	L	A	I	A	S	A	Q	A	A	A	T	T	V	I	A	A	K	E	R	A	D	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	T	A	A	G	S	G	C	A	A	A	I	D	A	E	R	W	L	A	E	H	A	A	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions