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Job DescriptionP77337
Confidence99.71%DateThu Jan 5 12:27:58 GMT 2012
Rank39Aligned Residues323
% Identity16%Templatec1pj6A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:n,n-dimethylglycine oxidase; PDBTitle: crystal structure of dimethylglycine oxidase of arthrobacter2 globiformis in complex with folic acid
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30 .........40 .........50... ......60.........70.........80.
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Query Sequence  DAIVVGAGVAGSVAALVMARAGLD. VLVIERGDSA. . . GCKNMTGGRLYAH. TLEAIIPGFAVSAPVERKVTREKISFLT
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Template Sequence  RIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPSKTMASFAKYTVEKLLSLTEDGVSCFN
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STT



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SGGGG






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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   82..... ..90.........100.........110.........120..
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Query Sequence  EESAVT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAG
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Template Sequence  QVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQLLIKRTESAG
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SST




TTS
GGG

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TT
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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   123......130.........140.........150.........160.... .....170.........180.........190.........200.
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Query Sequence  AQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADGVNS. MLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFN
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Template Sequence  VTYRGSTTVTGIEQSGGRVTGVQTADGVIPADIVVSCAGFWGAKIGAMIGMAVPLLPLAHQY. . . . VKTTPVPAQQGRND
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S

TTTT
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GGGTTT




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GGGTTTS
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   166...170.........180.........190.........200.........210.........220....... ..230.........240.
 
   202.......210.........220.........230....... ..240.........250.........260.
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Query Sequence  ITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGL. . . . . . . . . . . . . . . . . . . . VCGLGDIAHAQKSVPQMLEDFKQH
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Template Sequence  QPNGARLPILRHQDQ. . . . . . DLYYREHGDRYGIGSYAHRPMPVDVDTLGAYAPETVSEHHMPSRLDFTLEDFLPAWEAT
Template Known Secondary structure  TTT


S
GGG......TTT

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B

GGGS



GGG
BTTBSTT


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   242.......250...... ...260.........270.........280.........290.........300.........310.....
 
   262.......270.........280.........290.........300.........310.........320.........330.........340.
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Query Sequence  PAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNEGVMIVGDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAAKERADFS
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Template Sequence  KQLLPALADSEIEDGFNGIFSF. . . . . . . . . TPDGGPLLGESKELDGFYVAEAVWVTHSAGVAKAMAELLTTGRSETDLG
Template Known Secondary structure 
GGGGGS
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SSSBTS

GGGSS
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T
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   316...320.........330....... ..340.........350.........360.........370.........380......
 
   342......
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Query Sequence  ASSLAQY
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Template Conservation    
  

Template Sequence  ECDITRF
Template Known Secondary structure  TTBGGGS
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   387..390...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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