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Job DescriptionP77337
Confidence99.56%DateThu Jan 5 12:27:58 GMT 2012
Rank52Aligned Residues309
% Identity15%Templatec1c0iA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:d-amino acid oxidase; PDBTitle: crystal structure of d-amino acid oxidase in complex with2 two anthranylate molecules
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40 .........50.. .......60...
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Query Sequence  MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSA. GCKNMTGGRLYA. . . . . . . . . . . . . . . . HTLEAIIPGFA
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Template Sequence  MMHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDVSSQTFASPWAGANWTPFMTLTDGPRQAKWEESTFKKWV
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S


STT
SS
TT
TT
TTSSGGG


B



S
TTT
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   1000.........1010.........1020.........1030.........1040.........1050.........1060.........1070.........
 
   64.....70.........80... ......90.........100.........110.........120.......
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Query Sequence  VSAPVERKVTREKISFLTEE. . . . . . . . . . . . . . . . SAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIP
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Template Sequence  ELVPTGHAMWLKGTRRFAQNEDGLLGHWYKDITPNYRPLPSSECPPGAIGVTYDTLSVHAPKYCQYLARELQKLGATFER
Template Known Secondary structure  TTTTSSSSGGGGGGGTTTTTSTT


GGGS
TT


TT
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   1080.........1090.........1100.........1110.........1120.........1130.........1140.........1150.........
 
   128.130.........140.........150.........160.........170.........180.........190.........200.......
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Query Sequence  GVRVDALVREGNKVTGVQAGDDILEANVVILADGVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEG
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Template Sequence  RTVTS. . . . . . . . . . . . . LEQAFDGADLVVNATGLGA. . . . . . KSIAGIDDQAAEPIRGQTVLVKSPCKRCTMDSSDPAS
Template Known Secondary structure 


SB.............GGGT
SS
S

GGGG......GTSBTT

TT






S
TT
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   1160.... .....1170.........1180... ......1190.........1200.........1210.........1220
 
   208.210.........220.........230.........240.........250.........260.........270.........280...
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Query Sequence  AAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPE. . . .
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Template Sequence  PAYIIPRPGGEVICGGTYGVGDW. . . . . . . . . DLSVNPETVQRILKHCLRLDPTISSDGTIEGIEVLRHNVGLRPARRGG
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TTT


T

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S


GGGSSSSSGGG
TTS
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   1221........1230.........1240... ......1250.........1260.........1270.........1280.........1290.
 
   284.....290.........300.... .....310.........320.........330.......
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Query Sequence  . . . . . . . . . . GGLAMVPQLVNEGVMIVGDAA. . . GFCLNLGFTVRGMDLAIASAQAAATTVIAAKER
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Template Sequence  PRVEAERIVLPLDRTKSPLSLGRGSARAAKEKEVTLVHAYGFSSAGYQQSWGAAEDVAQLVDEAFQR
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TTT
TT
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   1292.......1300.........1310.........1320.........1330.........1340.........1350........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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