Job Description P16683 Confidence 2.48% Date Thu Jan 5 11:35:28 GMT 2012 Rank 31 Aligned Residues 88 % Identity 10% Template c3rkoF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	I	T	I	A	P	P	K	R	S	W	F	S	L	L	S	W	A	V	V	L	A	V	L	V	V	S	W	Q	G	A	E	M	A	P	L	T	L	I	K	D	G	G	N	M	A	T	F	A	A	D	F	F	P	P	D	F	S	Q	W	Q	D	Y	L	T	E	M	A	V	T	L	Q	I	A	V	W	G	T	A
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	I	E	Q	E	R	Q	W	L	K	P	Q	V	W	I	G	P	A	I	L	S	A	I	M	L	V	V	I	V	Y	A	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	N	D	Q	G	I	D	G	T	P	I	S	A	K	A	V	G	I	T	L	F	G	P	Y	V	L	A	V	E	L	A	S
Template Known Secondary structure		T	T						T	T		S																							T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S																				T	T	T	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.														.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	V	V	L	S	I	P	F	G	L	M	S	A	E	N	L	V	P	W	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	L	L	A	G	L	V	V	A	F	H	V	G	R	E	E	R	A	G	E
Template Known Secondary structure																					S	S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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