Job Description P16683 Confidence 100.00% Date Thu Jan 5 11:35:28 GMT 2012 Rank 4 Aligned Residues 229 % Identity 13% Template c3d31D_ PDB info PDB header:transport protein Chain: D: PDB Molecule:sulfate/molybdate abc transporter, permease PDBTitle: modbc from methanosarcina acetivorans Resolution 3.00 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	A	V	L	V	V	S	W	Q	G	A	E	M	A	P	L	T	L	I	K	D	G	G	N	M	A	T	F	A	A	D	F	F	P	P	D	F	S	Q	W	Q	D	Y	L	T	E	M	A	V	T	L	Q	I	A	V	W	G	T	A	L	A	V	V	L	S	I	P	F	G	L	M	S	A	E	N	L	V	P	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	F	V	F	S	F	L	L	L	V	L	F	L	F	I	F	L	T	L	S	N	M	I	F	E	Q	I	T	E	D	F	S	G	L	V	K	A	A	G	N	R	S	V	I	S	S	I	F	L	S	L	Y	A	G	F	L	A	T	L	L	A	L	L	L	G	A	P	T	G	Y	I	L	A	R	F	D	F	P	G
Template Known Secondary structure																																T																																											T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	V	Y	Q	P	V	R	R	L	M	D	A	C	R	A	I	N	E	M	V	F	A	M	L	F	V	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	L	G	P	F	A	G	V	L	A	L	F	I	H	T	T	G	V	L	S	K	L	L	S	E	A	V	E	A	I	E	P	G	P	V
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.
Template Sequence		K	.	.	R	L	V	E	S	I	I	D	V	P	V	V	V	P	H	T	V	A	G	I	A	L	L	T	V	F	G	S	R	G	L	I	G	E	P	L	E	S	Y	I	Q	F	R	D	A	L	P	G	I	V	V	A	M	L	F	V	S	M	P	Y	L	A	N	S	A	R	E	G	F	K	S	V	D	P	R	L	E
Template Known Secondary structure			.	.									G	G	G	T	S														S	T	T	S	T	T	T	G	G	G	T	T	T				T	T	S																											S
Template Predicted Secondary structure			.	.
Template SS confidence
		94			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		E	G	I	R	A	T	G	A	N	K	L	E	E	I	L	Y	G	V	L	P	Q	V	M	P	L	L	I	S	Y	S	L	Y	R	F	E	S	N	V	R	S	A	T	V	V	G	M	V	G	A	G	G	.	.	I	G	V	T	L	W	E	A	I	R	G	F	Q	F	Q	Q	T	C	A	L	M	V	L	I	I	V	T
Query Conservation																																																					.	.
Alig confidence																																																					.	.
Template Conservation
Template Sequence		N	A	A	R	S	L	G	A	P	L	W	K	A	F	F	F	V	T	L	P	L	S	A	R	Y	L	L	I	G	S	V	M	T	W	A	R	A	I	S	E	F	G	A	V	V	I	L	A	Y	Y	P	M	V	G	P	T	L	I	Y	D	R	F	I	S	Y	G	L	S	A	S	R	P	I	A	V	L	L	I	L	V
Template Known Secondary structure							T	T										T																						T											T	T														S	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		244	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	L	L	D	F	L	S	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	S	I	F	L	V	I	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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