Job Description P30859 Confidence 81.59% Date Thu Jan 5 11:46:36 GMT 2012 Rank 80 Aligned Residues 189 % Identity 12% Template d2ozza1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.30

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		G	F	D	V	D	L	A	Q	A	L	C	K	E	I	D	A	T	C	T	F	S	N	Q	A	F	D	S	.	L	I	P	S	L	K	F	R	R	V	E	A	V	M	A	G	M	D	I	T	P	E	R	E	K	Q	V	L	F	T	T	P	Y	Y	D	N	S	A	L	F	V	G	Q	Q	G	K	Y	T	S	V	D	Q
Query Conservation																													.
Alig confidence													.	.	.														.
Template Conservation													.	.	.
Template Sequence		G	L	A	S	G	L	K	A	Q	F	D	.	.	.	G	I	P	F	Y	Y	A	H	X	R	G	A	D	I	R	V	E	C	L	L	N	G	V	Y	D	X	A	V	V	S	R	L	A	A	E	S	Y	L	S	Q	N	N	L	C	I	A	L	E	L	G	P	H	T	Y	V	G	E	H	Q	L	I	C	R	K	G	E
Template Known Secondary structure										T	T	T	.	.	.	T	S								S											T	T	S		S																S										T	T	S	S	S									T	T
Template Predicted Secondary structure													.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		L	K	G	K	K	V	G	V	Q	N	G	T	T	H	Q	K	F	I	M	D	K	H	P	E	I	T	.	.	.	T	V	P	Y	D	S	Y	Q	N	A	K	L	D	L	Q	N	G	R	I	D	G	V	F	G	D	T	A	V	V	T	E	W	L	K	D	N	P	K	L	A	A	V	G	D	K	V	T	D	K	D	Y
Query Conservation																												.	.	.
Alig confidence																												.	.	.																																.	.	.
Template Conservation																																																														.	.	.
Template Sequence		S	G	N	V	K	R	V	G	L	D	S	R	S	A	D	Q	K	I	X	T	D	V	F	F	G	D	S	D	V	E	R	V	D	L	S	Y	H	E	S	L	Q	R	I	V	K	G	D	V	D	A	V	I	W	N	V	A	E	N	E	L	.	.	.	T	X	L	G	L	E	A	T	P	L	T	D	D	P	R	F	L
Template Known Secondary structure		G	G	G								T	T													T	T	S																			T	S														.	.	.			T	T								S
Template Predicted Secondary structure																																																														.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	T	G	L	G	I	A	V	R	Q	G	N	T	E	L	Q	Q	K	L	N	T	A	L	E	K	V	K	K	D	G	T	Y	E	T	I	Y	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	T	E	A	V	V	L	T	R	V	D	D	Y	P	X	Q	Q	L	L	R	A	V	V	D	K	H	A	L	L	A	H	Q	Q	R	V	V	S	G
Template Known Secondary structure			T	T								T	T																										T	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions