Job Description P30859 Confidence 93.45% Date Thu Jan 5 11:46:36 GMT 2012 Rank 66 Aligned Residues 180 % Identity 8% Template d2nxoa1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.04

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		A	T	C	T	F	S	N	Q	A	F	D	S	L	I	P	S	L	K	F	R	R	V	E	A	V	M	A	G	M	D	I	T	P	E	R	E	K	Q	V	L	F	T	T	P	Y	Y	.	.	D	N	S	A	L	F	V	G	Q	Q	G	K	Y	T	S	V	D	Q	L	K	G	K	K	V	G	V	Q	N	G	T	T	H
Query Conservation																																																.	.
Alig confidence																																																.	.
Template Conservation
Template Sequence		L	D	F	E	L	T	K	D	T	P	E	K	L	S	E	Q	L	V	R	G	D	L	D	I	G	P	V	T	L	V	E	F	L	K	N	A	D	D	L	V	A	F	P	D	I	A	V	G	C	D	G	P	V	M	S	C	V	I	V	S	Q	V	P	L	D	R	L	D	G	A	R	V	A	L	G	S	T	S	R	T
Template Known Secondary structure		G	G																	T	T	S		S												T	G	G	G												S	S			S	S						S	S		T	T	S		S	S	S						T	T		S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		138	.	140	.	.	.	.	.							.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure										.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.
Query Sequence		Q	K	F	I	M	D	K	H	.	.	.	.	.	.	P	E	I	T	T	V	P	Y	D	S	Y	Q	N	A	K	L	D	L	Q	N	G	R	I	D	G	V	F	G	D	T	A	V	V	T	E	W	L	K	D	N	P	K	L	A	A	V	G	D	K	V	T	D	K	D	Y	F	G	T	G	L	G	I	A	V	R	Q
Query Conservation										.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																																																										.	.	.
Template Conservation																																																																									.	.	.
Template Sequence		S	V	R	L	A	Q	L	L	L	S	E	R	F	G	V	Q	P	D	Y	Y	T	C	P	P	D	L	S	L	M	A	A	V	L	I	G	D	A	A	L	R	A	N	M	I	D	G	P	R	Y	G	L	D	V	H	D	L	G	A	L	W	K	E	W	T	G	L	P	F	V	F	A	.	.	.	V	W	A	A	R	R
Template Known Secondary structure													T	S													S	S																	T					T	T															S							.	.	.
Template Predicted Secondary structure																																																																									.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.
		212					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230						.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure			.	.	.	.																			.	.	.	.	.
Query SS confidence			.	.	.	.																			.	.	.	.	.
Query Sequence		G	.	.	.	.	N	T	E	L	Q	Q	K	L	N	T	A	L	E	K	V	K	K	D	.	.	.	.	.	G	T	Y	E	T	I	Y	N	K	W	F	Q
Query Conservation			.	.	.	.																			.	.	.	.	.
Alig confidence			.	.	.	.																			.	.	.	.	.
Template Conservation
Template Sequence		D	Y	A	E	R	E	P	V	I	T	R	K	V	H	E	A	F	L	A	S	R	N	L	S	L	E	E	V	E	K	V	A	E	Q	A	A	R	W	E	A
Template Known Secondary structure																												T										T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions