Job Description P30859 Confidence 39.75% Date Thu Jan 5 11:46:36 GMT 2012 Rank 103 Aligned Residues 181 % Identity 10% Template d2i6ea1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.50

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		T	C	T	F	S	N	Q	A	F	D	S	L	I	P	S	L	K	F	R	R	V	E	A	V	M	A	G	M	D	I	T	P	E	R	E	K	Q	V	L	F	T	T	P	Y	Y	D	N	S	A	L	F	V	G	Q	Q	G	K	Y	T	S	V	D	Q	L	K	G	K	K	V	G	V	Q	N	G	T	T	H	Q	K	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	T	A	I	T	G	V	P	T	Q	X	N	A	A	L	L	S	G	E	V	D	I	A	N	V	S	A	V	E	F	I	R	H	A	D	T	L	A	A	L	P	D	F	S	V	A	V	L	G	P	V	Y	S	V	N	L	F	H	T	C	P	L	P	E	L	R	R	V	A	L	T	S	Q	S	A	X	S	V	A
Template Known Secondary structure		T																		S	S		S												T	T	T	T												S	S			S	S						S	S		G	G	G								T	T
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		141	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.																		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure						.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	M	D	K	.	.	H	P	E	I	T	T	V	P	Y	D	S	Y	Q	N	A	K	L	D	L	Q	N	G	R	I	D	G	V	F	G	D	T	A	V	V	T	E	W	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	P	K	L	A	A	V	G	D	K	V	T	D	K	D	Y	F
Query Conservation						.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	E	V	L	L	R	Q	K	G	L	S	P	V	L	E	R	A	E	G	T	A	E	S	L	L	A	A	G	Y	D	G	V	L	R	I	G	D	D	A	L	R	E	W	Y	G	V	V	G	P	L	T	P	E	R	T	X	T	S	L	P	H	T	G	R	G	I	T	V	T	D	L	A	Q	E	W	F	D	L	T
Template Known Secondary structure										T	T										S							T	T	T		S						S											S					S	S	S		G	G	G			S			T	T
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.				210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure										.	.	.						.	.	.
Query SS confidence										.	.	.						.	.	.
Query Sequence		G	T	G	L	G	I	A	V	.	.	.	R	Q	G	N	T	.	.	.	E	L	Q	Q	K	L	N	T	A	L	E	K	V	K	K	D	G	T	Y	E	T	I	Y	N	K	W	F	Q	K
Query Conservation										.	.	.						.	.	.
Alig confidence										.	.	.						.	.	.																	.	.
Template Conservation																																					.	.
Template Sequence		G	H	P	F	T	F	A	V	W	A	Y	R	K	D	N	P	P	P	A	A	L	L	Q	A	X	R	E	A	R	R	R	G	I	G	H	.	.	L	A	E	V	S	Q	R	H	A	E	K
Template Known Secondary structure		S	S											T	T	S																				T	.	.											T
Template Predicted Secondary structure																																					.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions