Job Description P30859 Confidence 20.72% Date Thu Jan 5 11:46:36 GMT 2012 Rank 121 Aligned Residues 90 % Identity 13% Template d2hava1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.70

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.																.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	L	C	K	E	I	D	A	T	C	T	F	S	N	.	Q	A	F	D	S	L	I	P	S	L	K	F	R	R	V	E	A	V	M	A	G	M	D	I	T	P	E	R	E	K	Q	V	L	F	T	T	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	N	S	A	L	F	V	G	Q	Q
Query Conservation																	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	W	S	V	N	S	V	G	K	I	E	C	V	S	A	E	T	T	E	D	C	I	A	K	I	M	N	G	E	A	D	A	M	S	L	D	G	G	F	V	Y	I	A	G	K	C	G	L	V	P	V	L	A	E	N	Y	N	K	S	D	N	C	E	D	T	P	E	A	G	Y	F	A	V	A	V	V	K	K	S
Template Known Secondary structure									T	T	S							S	S											T	S																	T	T										S	S	T	T	S	G	G	G														T	T
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	Y	T	S	V	D	Q	L	K	G	K	K	V	G	V	Q	N	G	T	T	H	Q	K	F	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	D	L	T	W	D	N	L	K	G	K	K	S	C	H	T	A	V	G	R	T	A	G	W	N
Template Known Secondary structure		S	S	S			G	G	G		T	T						S		T	T		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions