Job Description P30859 Confidence 30.26% Date Thu Jan 5 11:46:36 GMT 2012 Rank 111 Aligned Residues 178 % Identity 13% Template d1z7me1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.90

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.															.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Query Sequence		I	V	G	F	D	V	D	L	A	Q	A	L	C	K	E	I	D	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	T	F	S	N	Q	A	F	D	S	L	I	P	S	L	K	F	R	R	V	E	A	V	M	A	G	M	D	I	T	P	E	R	E	.	.	K	Q	V	L	F	T	T	P	Y	Y	D
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation
Template Sequence		T	K	G	R	I	Q	K	Q	V	T	K	L	L	E	N	A	D	Y	D	V	E	P	I	R	E	L	Q	I	K	T	K	D	D	L	Q	I	I	F	G	K	P	N	D	V	I	T	F	L	E	H	G	I	V	D	I	G	F	V	G	K	D	T	L	D	E	N	D	F	D	D	Y	Y	E	L	L	Y	L	K	I	G
Template Known Secondary structure			T	T												T	T	T									S					T	T	S																	T	T	S		S												S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	A	L	F	V	G	Q	Q	G	K	Y	T	S	V	D	Q	L	K	G	K	K	V	G	V	Q	N	G	T	T	H	Q	K	F	I	M	D	K	H	P	E	I	T	T	V	P	Y	D	S	Y	Q	N	A	K	L	D	L	Q	N	G	R	I	D	G	V	F	G	D	T	A	V	V	T	E	W	L	K	D	N	P
Query Conservation
Alig confidence																																																							.	.																								.	.
Template Conservation																																																							.	.																								.	.
Template Sequence		Q	C	I	F	A	L	A	S	Y	P	D	F	S	N	K	N	F	Q	R	H	K	R	I	A	S	K	Y	P	R	V	T	K	K	Y	F	A	Q	K	Q	E	D	I	E	I	I	K	L	E	G	S	V	E	L	.	.	G	P	V	V	G	L	A	D	A	I	V	D	I	V	E	T	G	N	T	L	S	A	N	.	.
Template Known Secondary structure											G	G	G	G	G				S	S							S												T	T									S	S		T	T		.	.				T	T	S		S							S	S	S					T	T	.	.
Template Predicted Secondary structure																																																							.	.																								.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	A	A	V	G	D	K	V	T	D	K	D	Y	F	G	T	G	L	G	I	A	V	R	Q	G	N	T	E	L	Q	Q	K	L	N	T	A	L	E	K	V	K	K
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	G	L	E	V	I	E	K	I	S	D	I	S	T	R	M	I	V	N	K	S	S	F	K	F	K	K	D	K	I	I	E	M	V	E	R	L	E	D
Template Known Secondary structure		.	.	.	.	.	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions