Job Description P30859 Confidence 99.97% Date Thu Jan 5 11:46:36 GMT 2012 Rank 21 Aligned Residues 223 % Identity 24% Template d1xt8a1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.00

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																															.	.	.
Query SS confidence																																															.	.	.
Query Sequence		A	T	A	A	E	T	I	R	F	A	T	E	A	S	Y	P	P	F	E	S	I	D	A	N	N	Q	I	V	G	F	D	V	D	L	A	Q	A	L	C	K	E	I	D	A	T	.	.	.	C	T	F	S	N	Q	A	F	D	S	L	I	P	S	L	K	F	R	R	V	E	A	V	M	A	G	M	D	I	T	P	E
Query Conservation																																															.	.	.
Alig confidence																																															.	.	.
Template Conservation
Template Sequence		I	K	Q	N	G	V	V	R	I	G	V	F	G	D	K	P	P	F	G	Y	V	D	E	K	G	N	N	Q	G	Y	D	I	A	L	A	K	R	I	A	K	E	L	F	G	D	E	N	K	V	Q	F	V	L	V	E	A	A	N	R	V	E	F	L	K	S	N	K	V	D	I	I	L	A	N	F	T	Q	T	P	Q
Template Known Secondary structure						S	S							S			T	T	T					T	T	S				S															S		T	T									G	G	G							T	T	S		S				S	S		B
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		R	E	K	Q	V	L	F	T	T	P	Y	Y	D	N	S	A	L	F	V	G	Q	Q	G	K	Y	T	.	S	V	D	Q	L	K	G	K	K	V	G	V	Q	N	G	T	T	H	Q	K	F	I	M	D	K	H	P	E	I	T	T	V	P	Y	D	S	Y	Q	N	A	K	L	D	L	Q	N	G	R	I	D	G	V	F
Query Conservation																												.
Alig confidence																												.
Template Conservation
Template Sequence		R	A	E	Q	V	D	F	C	S	P	Y	M	K	V	A	L	G	V	A	V	P	K	D	S	N	I	T	S	V	E	D	L	K	D	K	T	L	L	L	N	K	G	T	T	A	D	A	Y	F	T	Q	N	Y	P	N	I	K	T	L	K	Y	D	Q	N	T	E	T	F	A	A	L	M	D	K	R	G	D	A	L	S
Template Known Secondary structure				T	T																		T	T					S	S	G	G	G	T	T	S						T	T	S											T	T	S						S	S										T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	T	A	V	V	T	E	W	L	K	D	N	P	K	L	A	A	V	G	D	K	V	T	D	K	D	Y	F	G	T	G	L	G	I	A	V	R	Q	G	N	T	E	L	Q	Q	K	L	N	T	A	L	E	K	V	K	K	D	G	T	Y	E	T	I	Y	N	K	W	F	Q	K
Query Conservation
Alig confidence																					.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		H	D	N	T	L	L	F	A	W	V	K	D	H	P	D	F	K	M	G	.	.	.	.	I	K	E	L	G	N	K	D	V	I	A	P	A	V	K	K	G	D	K	E	L	K	E	F	I	D	N	L	I	I	K	L	G	Q	E	Q	F	F	H	K	A	Y	D	E	T	L	K	A
Template Known Secondary structure															T	T					.	.	.	.																T	T																	T	T	T										T	G	G
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.					.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions