Job Description P30859 Confidence 97.83% Date Thu Jan 5 11:46:36 GMT 2012 Rank 45 Aligned Residues 187 % Identity 13% Template d1xs5a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.85

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																						.																															.	.	.	.
Query SS confidence																						.																															.	.	.	.
Query Sequence		V	D	L	A	Q	A	L	C	K	E	I	D	A	T	C	T	F	S	N	Q	.	A	F	D	S	L	I	P	S	L	K	F	R	R	V	E	A	V	M	A	G	M	D	I	T	P	E	R	E	K	Q	.	.	.	.	V	L	F	T	T	P	Y	Y	D	N	S	A	L	F	V	G	Q	Q	G	K	Y	T	S	V	D
Query Conservation																						.																															.	.	.	.
Alig confidence																						.																															.	.	.	.
Template Conservation
Template Sequence		L	E	I	A	K	E	E	V	K	K	Q	H	I	E	L	R	I	V	E	F	T	N	Y	V	A	L	N	E	A	V	M	R	G	D	I	L	M	N	F	F	Q	H	V	P	H	M	Q	Q	F	N	Q	E	H	N	G	D	L	V	S	V	G	N	V	H	V	E	P	L	A	L	Y	S	R	T	Y	R	H	V	S	D
Template Known Secondary structure											T	T	T									S												T	S	S	S																		T																			S	S			S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150																							.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	K	G	K	K	V	G	V	Q	N	G	T	T	H	Q	K	F	I	M	D	K	H	P	E	I	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	Y	D	S	Y	Q	N	A	K	L	D	L	Q	N	G	R	I	D	G	V	F	G	D	T	A	V	V	T	E
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation																																																																													.	.	.	.
Template Sequence		F	P	A	G	A	V	I	A	I	P	N	D	S	S	N	E	A	R	A	L	R	L	L	E	A	A	G	F	I	R	M	R	A	G	S	G	L	F	A	T	V	E	D	V	Q	Q	N	V	R	N	V	V	L	Q	E	V	E	S	A	L	L	P	R	V	F	D	Q	V	D	G	A	V	I	N	G	.	.	.	.	N
Template Known Secondary structure				T	T								S														T	T	S					T	T			T	T			G	G	G					T	T									G	G	G					G	G	G	S	S							.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		W	L	K	D	N	P	K	L	A	A	V	G	D	K	V	T	D	K	D	Y	F	G	T	G	L	G	I	A	V	R	Q	G	.	.	N	T	E	L	Q	Q	K	L	N	T	A	L	E	K	V	K	K	D	G	T	Y	E	T	I	Y	N	K	W	F	Q
Query Conservation																																		.	.
Alig confidence																																		.	.													.	.	.	.
Template Conservation																																																.	.	.	.
Template Sequence		Y	A	I	M	A	G	L	S	A	R	R	D	G	L	A	V	E	P	D	A	S	A	Y	A	N	V	L	V	V	K	R	G	N	E	A	D	A	R	V	Q	A	V	L	R	A	L	.	.	.	.	C	G	G	R	V	R	T	Y	L	K	E	R	Y	K
Template Known Secondary structure						T	T			T	T	T	T		S				S		G	G	G	G								T	T		T	T												.	.	.	.	T	S												T
Template Predicted Secondary structure																																																.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.					.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions