Job Description P30859 Confidence 99.95% Date Thu Jan 5 11:46:36 GMT 2012 Rank 32 Aligned Residues 218 % Identity 14% Template d1s50a1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.65

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.								.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.														.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	E	T	I	R	F	A	T	E	A	S	Y	P	P	F	E	S	I	D	A	N	N	Q	I	.	.	.	.	.	.	.	V	G	F	D	V	D	L	A	Q	A	L	C	K	E	I	D	A	T	C	T	F	S	N	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	S	L	I	P	S	L	K	F
Query Conservation																											.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.															.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		S	N	R	S	L	I	V	T	T	I	.	L	E	E	P	Y	V	L	F	K	K	S	D	K	P	L	Y	G	N	D	R	F	E	G	Y	C	I	D	L	L	R	E	L	S	T	I	L	G	F	T	Y	E	I	R	L	V	E	D	G	K	Y	G	A	Q	D	D	V	N	G	Q	W	N	G	M	V	R	E	L	I	D
Template Known Secondary structure												.		B	T	T	T	B						S	S				G	G	G	G			S														T									T	T						B		T	T	T			B									T
Template Predicted Secondary structure												.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		R	R	V	E	A	V	M	A	G	M	D	I	T	P	E	R	E	K	Q	V	L	F	T	T	P	Y	Y	D	N	S	A	L	F	V	G	Q	Q	G	K	Y	T	.	.	S	V	D	Q	L	K	G	K	K	V	G	V	Q	N	G	T	T	H	Q	K	F	I	M	D	K	H	P	E	I	T	T	V	P	Y	D	S	Y
Query Conservation																																											.	.
Alig confidence																																											.	.
Template Conservation
Template Sequence		H	K	A	D	L	A	V	A	P	L	A	I	T	Y	V	R	E	K	V	I	D	F	S	K	P	F	M	T	L	G	I	S	I	L	Y	R	K	P	I	D	S	A	D	D	L	A	K	Q	T	K	I	E	Y	G	A	V	E	D	G	A	T	M	T	F	F	K	K	S	K	I	S	T	Y	D	K	M	W	A	F	M
Template Known Secondary structure		T	S		S				S	S		B							T	T					S		S															S						T		S	S	S					B	T	T	S											S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		157	.	.	160	.	.	.	.	.	.	.	.												.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	N	A	K	L	D	L	Q	N	G	R	I	.	.	.	.	.	.	.	.	.	.	.	D	G	V	F	G	D	T	A	V	V	T	E	W	L	K	D	N	P	K	L	A	A	V	G	D	K	V	T	D	K	D	Y	F	G	T	G	L	G	I	A	V	R	Q	G	N	T	E	L	Q	Q	K	L	N	T	A	L	E
Query Conservation														.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.																				.
Template Conservation																																															.	.	.	.	.																				.
Template Sequence		S	S	R	R	Q	S	V	L	V	K	S	N	E	E	G	I	Q	R	V	L	T	S	D	Y	A	F	L	M	E	S	T	T	I	E	F	V	T	Q	R	N	C	N	L	T	Q	.	.	.	.	.	I	G	G	L	I	D	S	K	G	Y	G	V	G	T	P	M	G	S	P	.	Y	R	D	K	I	T	I	A	I	L
Template Known Secondary structure				T					S	B	S	S											S	S															T	T		T	T				.	.	.	.	.		S	S		S	S										T	T		T	.
Template Predicted Secondary structure																																															.	.	.	.	.																				.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.						.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	K	K	D	G	T	Y	E	T	I	Y	N	K	W	F	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	Q	E	E	G	K	L	H	M	M	K	E	K	W	W	R	G
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions