Job Description P30859 Confidence 97.62% Date Thu Jan 5 11:46:36 GMT 2012 Rank 52 Aligned Residues 173 % Identity 15% Template c3qslA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported protein; PDBTitle: structure of cae31940 from bordetella bronchiseptica rb50 Resolution 2.00 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.								.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																.																																			.	.	.	.	.	.	.
Query SS confidence																.																																			.	.	.	.	.	.	.
Query Sequence		L	C	K	E	I	D	A	T	C	T	F	S	N	Q	.	A	F	D	S	L	I	P	S	L	K	F	R	R	V	E	A	V	M	A	G	M	D	I	T	P	E	R	E	K	Q	V	L	F	T	.	.	.	.	.	.	.	T	P	Y	Y	D	N	S	A	L	F	V	G	Q	Q	G	K	Y	T	S	V	D	Q	L	K
Query Conservation																.																																			.	.	.	.	.	.	.
Alig confidence																.																																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	F	K	D	E	G	L	D	V	S	I	A	D	F	A	G	G	S	K	A	L	Q	A	V	V	G	G	S	A	D	V	V	S	G	A	F	E	H	T	L	S	L	Q	A	K	G	Q	F	Y	R	A	F	A	L	Q	G	R	A	P	X	I	G	V	G	V	S	K	K	N	L	P	G	Y	K	G	P	A	D	L	K
Template Known Secondary structure						T	T									S	S										T	T	S		S						T									T	T									S	B	S	S									T	T	T		T	T			S	G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.									.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.
Query Sequence		G	K	K	V	G	V	Q	N	G	T	T	H	Q	K	F	I	M	D	K	.	.	.	.	.	.	.	.	H	P	E	I	T	T	V	P	Y	D	S	Y	Q	N	A	K	L	D	L	Q	N	G	R	I	D	G	V	F	G	D	T	A	V	V	T	E	W	L	K	D	N	P	K	L	A	A	V	G	D	K	V	T	D
Query Conservation																					.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	K	I	G	V	T	A	P	G	S	S	T	N	X	V	V	N	F	F	L	A	K	H	G	L	K	A	S	D	V	S	F	I	G	V	G	A	G	A	G	A	V	T	A	L	R	S	G	Q	I	D	A	I	S	N	T	D	P	V	V	S	X	L	E	T	S	G	D	I	Q	I	I	V	D	T	R	T	L	K
Template Known Secondary structure		T						S	S	T	T	S													T	T			G	G	G	S							S	S										T	S		S						T	T								T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		198	.	200						.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.													.	.	.	.
Query SS confidence					.	.	.	.	.													.	.	.	.
Query Sequence		K	D	Y	.	.	.	.	.	F	G	T	G	L	G	I	A	V	R	Q	G	.	.	.	.	N	T	E	L	Q	Q	K	L	N	T	A	L	E	K
Query Conservation					.	.	.	.	.													.	.	.	.
Alig confidence					.	.	.	.	.													.	.	.	.
Template Conservation
Template Sequence		D	T	K	E	I	F	G	G	N	X	P	A	G	C	L	Y	A	P	Q	A	F	V	D	A	N	P	N	T	A	Q	A	L	T	N	A	I	V	R
Template Known Secondary structure								S	S
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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