Return to main results Retrieve Phyre Job Id

Job DescriptionP30859
Confidence28.25%DateThu Jan 5 11:46:36 GMT 2012
Rank113Aligned Residues41
% Identity0%Templatec3lvuB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:abc transporter, periplasmic substrate-binding protein; PDBTitle: crystal structure of abc transporter, periplasmic substrate-binding2 protein spo2066 from silicibacter pomeroyi
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70.........80.......
Predicted Secondary structure 











Query SS confidence 








































Query Sequence  DVDLAQALCKEIDATCTFSNQAFDSLIPSLKFRRVEAVMAG
Query Conservation    

   
    
                   
  
     
Alig confidence 








































Template Conservation   
  
   
   

 
 
                 
     
Template Sequence  VLEIYTRALERLGIAAQIEKVDNAQYTARVAELDFDLTPFR
Template Known Secondary structure  TT



TT

S
Template Predicted Secondary structure 











Template SS confidence 








































   454.....460.........470.........480.........490....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions