Job Description P30859 Confidence 100.00% Date Thu Jan 5 11:46:36 GMT 2012 Rank 6 Aligned Residues 220 % Identity 32% Template c3kzgB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:arginine 3rd transport system periplasmic binding PDBTitle: crystal structure of an arginine 3rd transport system2 periplasmic binding protein from legionella pneumophila Resolution 2.06 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		T	I	R	F	A	T	E	A	S	Y	P	P	F	E	S	I	.	D	A	N	N	Q	I	V	G	F	D	V	D	L	A	Q	A	L	C	K	E	I	D	A	T	C	T	F	S	N	Q	A	F	D	S	L	I	P	S	L	K	F	R	R	V	E	A	V	M	A	G	M	D	I	T	P	E	R	E	K	Q	V	L	F
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		N	L	T	I	G	T	S	K	F	N	P	P	F	E	V	W	S	G	N	N	S	S	L	Y	G	F	D	I	D	L	X	Q	E	I	C	R	R	L	H	A	T	C	T	F	E	A	Y	I	F	D	D	L	F	P	A	L	K	N	R	E	V	D	L	V	I	A	S	X	I	I	T	D	E	R	K	K	H	F	I	F
Template Known Secondary structure									S			T	T	T						T	T	S				S														T										G	G	G							T	T	S	S	S				S	S		B							T	T
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		T	T	P	Y	Y	D	N	S	A	L	F	V	G	Q	.	Q	G	K	Y	T	S	V	D	Q	L	K	G	K	K	V	G	V	Q	N	G	T	T	H	Q	K	F	I	M	D	K	H	P	E	I	T	T	V	P	Y	D	S	Y	Q	N	A	K	L	D	L	Q	N	G	R	I	D	G	V	F	G	D	T	A	V	V	T
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		S	L	P	Y	X	E	S	N	S	Q	Y	I	T	T	V	D	S	K	I	S	T	F	D	D	L	H	G	K	K	I	G	V	R	K	G	T	P	Y	A	R	Q	V	L	S	E	N	R	N	N	Q	V	I	F	Y	E	L	I	Q	D	X	L	L	G	L	S	N	N	Q	V	D	A	S	L	X	D	Y	E	A	A	K
Template Known Secondary structure					S	B										T	T		S			S	G	G	G	G	T	T							T	T	S	T								T		S								S	S										T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		E	W	L	K	D	N	P	K	L	A	A	V	G	.	.	.	.	D	K	V	T	D	K	D	Y	F	G	T	G	L	G	I	A	V	R	Q	G	N	T	E	L	Q	Q	K	L	N	T	A	L	E	K	V	K	K	D	G	T	Y	E	T	I	Y	N	K	W	F
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.
Template Conservation
Template Sequence		Y	W	X	A	S	E	P	Y	A	Y	K	L	I	G	K	K	Y	K	L	I	G	K	K	I	S	I	G	E	G	Y	S	I	X	A	N	P	D	Q	F	V	L	I	K	K	I	N	K	I	L	L	E	X	E	A	D	G	T	Y	L	R	L	Y	S	E	Y	F
Template Known Secondary structure			T	T	S	S	S		S	S		T	T	T			S											T	T		B						G	G	G																		T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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