Job Description P30859 Confidence 100.00% Date Thu Jan 5 11:46:36 GMT 2012 Rank 10 Aligned Residues 222 % Identity 27% Template c3delC_ PDB info PDB header:protein binding, transport protein Chain: C: PDB Molecule:arginine binding protein; PDBTitle: the structure of ct381, the arginine binding protein from the2 periplasm chlamydia trachomatis Resolution 1.92 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	I	R	F	A	T	E	A	S	Y	P	P	F	E	S	I	D	A	N	N	Q	I	V	G	F	D	V	D	L	A	Q	A	L	C	K	E	I	D	A	T	C	T	F	S	N	Q	A	F	D	S	L	I	P	S	L	K	F	R	R	V	E	A	V	M	A	G	M	D	I	T	P	E	R	E	K	Q	V	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	F	I	V	G	T	N	A	T	Y	P	P	F	E	F	V	D	K	R	G	E	V	V	G	F	D	I	D	L	A	R	E	I	S	N	K	L	G	K	T	L	D	V	R	E	F	S	F	D	A	L	I	L	N	L	K	Q	H	R	I	D	A	V	I	T	G	M	S	I	T	P	S	R	L	K	E	I	L	M
Template Known Secondary structure										S		B	T	T	T	B				T	T	S				S														T										G	G	G							T	T	S	S	S				S	S	B	B							T	T	S
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		101	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		T	T	P	Y	Y	D	N	S	A	.	L	F	V	G	Q	Q	G	K	Y	T	S	V	D	Q	L	K	G	K	K	V	G	V	Q	N	G	T	T	H	Q	K	F	I	M	D	K	H	P	E	I	T	T	V	P	Y	D	S	Y	Q	N	A	K	L	D	L	Q	N	G	R	I	D	G	V	F	G	D	T	A	V	V	T
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		I	P	Y	Y	G	E	E	I	K	H	L	V	L	V	F	K	G	E	N	K	H	P	L	P	L	T	Q	Y	R	S	V	A	V	Q	T	G	T	Y	Q	E	A	Y	L	Q	S	L	S	E	V	H	I	R	S	F	D	S	T	L	E	V	L	M	E	V	M	H	G	K	S	P	V	A	V	L	E	P	S	I	A	Q
Template Known Secondary structure										S								S			S					G	G	G	S	S						T	T	S									S	T	T							S	S										T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	W	L	K	D	N	P	K	L	A	A	V	G	D	K	V	T	D	K	D	Y	F	G	T	G	L	G	I	A	V	R	Q	G	N	T	E	L	Q	Q	K	L	N	T	A	L	E	K	V	K	K	D	G	T	Y	E	T	I	Y	N	K	W	F	Q	K
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		V	V	L	K	D	F	P	A	L	S	.	T	A	T	I	D	L	P	E	D	Q	W	V	L	G	Y	G	I	G	V	A	S	D	R	P	A	L	A	L	K	I	E	A	A	V	Q	E	I	R	K	E	G	V	L	A	E	L	E	Q	K	W	G	L	N
Template Known Secondary structure				G	G	G		T	T			.								G	G	G											T	T																		T	T										T	G	G
Template Predicted Secondary structure												.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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