Return to main results Retrieve Phyre Job Id

Job DescriptionP30859
Confidence96.22%DateThu Jan 5 11:46:36 GMT 2012
Rank58Aligned Residues184
% Identity17%Templatec2de4B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:dibenzothiophene desulfurization enzyme b; PDBTitle: crystal structure of dszb c27s mutant in complex with biphenyl-2-2 sulfinic acid
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60....... ..70.........80.........90.........100 .........110......
Predicted Secondary structure 




.










.....















Query SS confidence 
























.
































. . . . .















Query Sequence  IVGFDVDLAQALCKEIDATCTFSNQ. AFDSLIPSLKFRRVEAVMAGMDITPEREKQVLF. . . . . TTPYYDNSALFVGQQG
Query Conservation    
   

   
    
        .           
  
                  .....                
Alig confidence 
























.
































.....















Template Conservation    

 

  

 
 






                
  
           
         
          


   
Template Sequence  PNALLTASESGFLDAAGIELDVLSGQQGTVHFTYDQPAYTRFGGEIPPLLSEGLRAPGRTRLLGITPLLGRQGFFVRDDS
Template Known Secondary structure 

TTTT
BGGGTT

STT
STT
TTS

S
TT
Template Predicted Secondary structure 

























Template SS confidence 















































































   30.........40.........50.........60.........70.........80.........90.........100.........
 
   117..120.........130. ........140.........150.
Predicted Secondary structure 








..........................






...................
Query SS confidence 














. . . . . . . . . . . . . . . . . . . . . . . . . .



















. . . . . . . . . . . . . . . . . . .
Query Sequence  KYTSVDQLKGKKVGV. . . . . . . . . . . . . . . . . . . . . . . . . . QNGTTHQKFIMDKHPEITTV. . . . . . . . . . . . . . . . . . .
Query Conservation                 ..........................                    ...................
Alig confidence 














..........................



















...................
Template Conservation   
 
  

 




                             

     
   
   

   

  
            
Template Sequence  PITAAADLAGRRIGVSASAIRILRGQLGDYLELDPWRQTLVALGSWEARALLHTLEHGELGVDDVELVPISSPGVDVPAE
Template Known Secondary structure  S

SGGGGTT

T

TTGGGS
TTTTT

GGGS


TTTS

Template Predicted Secondary structure 








































Template SS confidence 















































































   110.........120.........130.........140.........150.........160.........170.........180.........
 
   152.......160.........170.........180.........190.........200.........210.. ..
Predicted Secondary structure  .............

































....
Query SS confidence  . . . . . . . . . . . . .




























































. . . .

Query Sequence  . . . . . . . . . . . . . PYDSYQNAKLDLQNGRIDGVFGDTAVVTEWLKDNPKLAAVGDKVTDKDYFGTGLGIAVRQG. . . . NT
Query Conservation  .............           
  
  
                                         
 ....  
Alig confidence  .............

































...























....

Template Conservation                         

  
 


     
        
...                         
   
Template Sequence  QLEESATVKGADLFPDVARGQAAVLASGDVDALYSWLPWAGELQATG. . . ARPVVDLGLDERNAYASVWTVSSGLVRQRP
Template Known Secondary structure  SSBSSSTTTS
STTT...
SS
GGGSGGG

Template Predicted Secondary structure 


























...













Template SS confidence 















































































   190.........200.........210.........220.........230...... ...240.........250.........260......
 
   215....220.........
Predicted Secondary structure 
Query SS confidence 














Query Sequence  ELQQKLNTALEKVKK
Query Conservation   
   

  
  
  
Alig confidence 














Template Conservation 
 
  

 
  

  
Template Sequence  GLVQRLVDAAVDAGL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 














   267..270.........280.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions