Job Description P0A9B2 Confidence 100.00% Date Thu Jan 5 11:09:48 GMT 2012 Rank 4 Aligned Residues 327 % Identity 48% Template c3hq4R_ PDB info PDB header:oxidoreductase Chain: R: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase 1; PDBTitle: crystal structure of c151s mutant of glyceraldehyde-3-phosphate2 dehydrogenase 1 (gapdh1) complexed with nad from staphylococcus3 aureus mrsa252 at 2.2 angstrom resolution Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	I	K	V	G	I	N	G	F	G	R	I	G	R	I	V	F	R	A	A	Q	K	R	S	D	I	E	I	V	A	I	N	D	L	L	D	A	D	Y	M	A	Y	M	L	K	Y	D	S	T	H	G	R	F	D	G	T	V	E	V	K	D	G	H	L	I	V	N	G	K	K	I	R	V	T	A	E	R	D	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	A	V	K	V	A	I	N	G	F	G	R	I	G	R	L	A	F	R	R	I	Q	E	V	E	G	L	E	V	V	A	V	N	D	L	T	D	D	D	M	L	A	H	L	L	K	Y	D	T	M	Q	G	R	F	T	G	E	V	E	V	V	D	G	G	F	R	V	N	G	K	E	V	K	S	F	S	E	P	D	A
Template Known Secondary structure												S											T	T	S	T	T									S	S													T	T	T					S						T	T					T	T									S		G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		A	N	L	K	W	D	E	V	G	V	D	V	V	A	E	A	T	G	L	F	L	T	D	E	T	A	R	K	H	I	T	A	G	A	K	K	V	V	M	T	G	P	S	K	D	N	T	P	M	F	V	K	G	A	N	F	D	K	Y	A	G	Q	.	D	I	V	S	N	A	S	C	T	T	N	C	L	A	P	L	A
Query Conservation																																																																.
Alig confidence																																																																.
Template Conservation
Template Sequence		S	K	L	P	W	K	D	L	N	I	D	V	V	L	E	C	T	G	F	Y	T	D	K	D	K	A	Q	A	H	I	E	A	G	A	K	K	V	L	I	S	A	P	A	T	G	D	L	K	T	I	V	F	N	T	N	H	Q	E	L	D	G	S	E	T	V	V	S	G	A	S	S	T	T	N	S	L	A	P	V	A
Template Known Secondary structure		G	G	S		T	T	T	T	T		S						S	S	S			B											T		S					S	S			B	S	S						T	T	T	T	G	G	G			S			S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		K	V	I	N	D	N	F	G	I	I	E	G	L	M	T	T	V	H	A	T	T	A	T	Q	K	T	V	D	G	P	S	H	K	.	D	W	R	G	G	R	G	A	S	Q	N	I	I	P	S	S	T	G	A	A	K	A	V	G	K	V	L	P	E	L	N	G	K	L	T	G	M	A	F	R	V	P	T	P	N	V
Query Conservation																																			.
Alig confidence																																			.
Template Conservation
Template Sequence		K	V	L	N	D	D	F	G	L	V	E	G	L	M	T	T	I	H	A	Y	T	G	D	Q	N	T	Q	D	A	P	H	R	K	G	D	K	R	R	A	R	A	A	A	E	N	I	I	P	N	S	T	G	A	A	K	A	I	G	K	V	I	P	E	I	D	G	K	L	D	G	G	A	Q	R	V	P	V	A	T	G
Template Known Secondary structure																							T	T	S		S	S	S				T	T			T	T	T	T	S		G	G	G									T	T	T	T	G	G	G	T		G	G	G	T	T	S									S		S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		239	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure														.																																																				.	.	.
Query SS confidence														.																																																				.	.	.
Query Sequence		S	V	V	D	L	T	V	R	L	E	K	A	.	A	T	Y	E	Q	I	K	A	A	V	K	A	A	A	E	G	E	M	K	G	V	L	G	Y	T	E	D	D	V	V	S	T	D	F	N	G	E	V	C	T	S	V	F	D	A	K	A	G	I	A	L	.	.	.	N	D	N	F	V	K	L	V	S	W	Y	D	N
Query Conservation														.																																																				.	.	.
Alig confidence														.																.	.	.	.																																	.	.	.
Template Conservation																														.	.	.	.
Template Sequence		S	L	T	E	L	T	V	V	L	E	K	Q	D	V	T	V	E	Q	V	N	E	A	M	K	N	A	S	N	.	.	.	.	E	S	F	G	Y	T	E	D	E	I	V	S	S	D	V	V	G	M	T	Y	G	S	L	F	D	A	T	Q	T	R	V	M	S	V	G	D	R	Q	L	V	K	V	A	A	W	Y	D	N
Template Known Secondary structure											S	S	S	S													T		S	.	.	.	.	S	S						S				G	G	G	G	T	T				S					G	G	G							T	T												T
Template Predicted Secondary structure																														.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.					.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	G	Y	S	N	K	V	L	D	L	I	A	H	I	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	M	S	Y	T	A	Q	L	V	R	T	L	A	Y	L	A	E
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions