Job Description P0A9B2 Confidence 100.00% Date Thu Jan 5 11:09:48 GMT 2012 Rank 10 Aligned Residues 330 % Identity 49% Template c3b20R_ PDB info PDB header:oxidoreductase Chain: R: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase (nadp+); PDBTitle: crystal structure analysis of dehydrogenase complexed with nad Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		M	T	I	K	V	G	I	N	G	F	G	R	I	G	R	I	V	F	R	A	A	Q	K	R	S	.	.	D	I	E	I	V	A	I	N	D	L	L	D	A	D	Y	M	A	Y	M	L	K	Y	D	S	T	H	G	R	F	D	G	T	V	E	V	K	D	G	H	L	I	V	N	G	K	K	I	R	V	T	A	E	R
Query Conservation																											.	.
Alig confidence																											.	.
Template Conservation
Template Sequence		M	T	I	R	V	A	I	N	G	F	G	R	I	G	R	N	F	L	R	C	W	F	G	R	Q	N	T	D	L	E	V	V	A	I	N	N	T	S	D	A	R	T	A	A	H	L	L	E	Y	D	S	V	L	G	R	F	N	A	D	I	S	Y	D	E	N	S	I	T	V	N	G	K	T	M	K	I	V	C	D	R
Template Known Secondary structure												S												T		S	S		S									S	S													T	T	T					S						S	S					T	T									S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																			.																	.	.
Query SS confidence																																																			.																	.	.
Query Sequence		D	P	A	N	L	K	W	D	E	V	G	V	D	V	V	A	E	A	T	G	L	F	L	T	D	E	T	A	R	K	H	I	T	A	G	A	K	K	V	V	M	T	G	P	S	K	D	N	T	.	P	M	F	V	K	G	A	N	F	D	K	Y	A	G	Q	D	.	.	I	V	S	N	A	S	C	T	T	N	C	L
Query Conservation																																																			.																	.	.
Alig confidence																																																			.																	.	.
Template Conservation
Template Sequence		N	P	L	N	L	P	W	K	E	W	D	I	D	L	V	I	E	S	T	G	V	F	V	T	A	E	G	A	S	K	H	I	Q	A	G	A	K	K	V	L	I	T	A	P	G	K	G	E	G	V	G	T	Y	V	I	G	V	N	D	S	E	Y	R	H	E	D	F	A	V	I	S	N	A	S	C	T	T	N	C	L
Template Known Secondary structure			G	G	G			T	T	T	T	T								S	S	S			S										T	T		S					S	S				S	S	S						T	T	T	T	G	G	G			T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	L	A	K	V	I	N	D	N	F	G	I	I	E	G	L	M	T	T	V	H	A	T	T	A	T	Q	K	T	V	D	G	P	S	H	K	D	W	R	G	G	R	G	A	S	Q	N	I	I	P	S	S	T	G	A	A	K	A	V	G	K	V	L	P	E	L	N	G	K	L	T	G	M	A	F	R	V	P	T
Query Conservation
Alig confidence																																				.
Template Conservation																																				.
Template Sequence		A	P	V	A	K	V	L	H	D	N	F	G	I	I	K	G	T	M	T	T	T	H	S	Y	T	L	D	Q	R	I	L	D	A	S	.	H	R	D	L	R	R	A	R	A	A	A	V	N	I	V	P	T	T	T	G	A	A	K	A	V	A	L	V	I	P	E	L	K	G	K	L	N	G	I	A	L	R	V	P	T
Template Known Secondary structure																											T	T	S		S	S	S			.		S	S	T	T	T	T	S		G	G	G								S					G	G	G	T	S	G	G	G	T	T	S	B								S
Template Predicted Secondary structure																																				.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	V	S	V	V	D	L	T	V	R	L	E	K	A	A	T	Y	E	Q	I	K	A	A	V	K	A	A	A	E	G	E	M	K	G	V	L	G	Y	T	E	D	D	V	V	S	T	D	F	N	G	E	V	C	T	S	V	F	D	A	K	A	G	I	A	L	N	D	N	F	V	K	L	V	S	W	Y	D	N	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	N	V	S	V	V	D	L	V	V	Q	V	E	K	P	T	I	T	E	Q	V	N	E	V	L	Q	K	A	S	Q	T	T	M	K	G	I	I	K	Y	S	D	L	P	L	V	S	S	D	F	R	G	T	D	E	S	S	I	V	D	S	S	L	T	L	V	M	D	G	D	L	V	K	V	I	A	W	Y	D	N	E
Template Known Secondary structure		S	S											S	S																	T	T	T	T	T	T						S				G	G	G	G	T	T				S					G	G	G					T	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	Y	S	N	K	V	L	D	L	I	A	H	I	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	G	Y	S	Q	R	V	V	D	L	A	E	L	A	A	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions