Job Description P0A9B2 Confidence 100.00% Date Thu Jan 5 11:09:48 GMT 2012 Rank 68 Aligned Residues 296 % Identity 18% Template c2hjsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:usg-1 protein homolog; PDBTitle: the structure of a probable aspartate-semialdehyde dehydrogenase from2 pseudomonas aeruginosa Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure											.															.	.
Query SS confidence											.															.	.
Query Sequence		T	I	K	V	G	I	N	G	F	.	G	R	I	G	R	I	V	F	R	A	A	Q	K	R	.	.	S	D	I	E	I	V	A	I	N	D	L	L	D	A	D	Y	M	A	Y	M	L	K	Y	D	S	T	H	G	R	F	D	G	T	V	E	V	K	D	G	H	L	I	V	N	G	K	K	I	R	V	T	A	E	R
Query Conservation											.															.	.
Alig confidence											.															.	.										.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	N	V	A	V	V	G	A	T	G	S	V	G	E	A	L	V	G	L	L	D	E	R	D	F	P	L	H	R	L	H	L	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	E	S	A	G	Q	.	.	.	.	.	.	.	.	.	.	R	X	G	F	A	E	S	S	L	R	V	G	D	V	D
Template Known Secondary structure									T	T	T	S													T	T				S							.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T	T		.	.	.	.	.	.	.	.	.	.					T	T								G	G
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.														.	40	.	.	.	.	.											.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																.																	.	.	.
Query SS confidence																																																.																	.	.	.
Query Sequence		D	P	A	N	L	K	W	D	E	V	G	V	D	V	V	A	E	A	T	G	L	F	L	T	D	E	T	A	R	K	H	I	T	A	G	A	K	K	V	V	M	T	G	P	S	K	.	D	N	T	P	M	F	V	K	G	A	N	F	D	K	Y	A	.	.	.	G	Q	D	I	V	S	N	A	S	C	T	T	N	C
Query Conservation																																																.																	.	.	.
Alig confidence		.	.	.	.	.																																										.																	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	S	F	D	F	S	S	V	G	L	A	F	F	A	A	A	A	E	V	S	R	A	H	A	E	R	A	R	A	A	G	C	S	V	I	D	L	S	G	A	L	E	P	S	V	A	P	P	V	X	V	S	V	N	A	E	R	L	A	S	Q	A	A	P	F	L	L	S	S	P	C	A	V	A	A	E
Template Known Secondary structure		.	.	.	.	.	G			G	G	G		S						S															T	T						T	T		T	T	T	T	T	T	S		B							G	G	G	G	G	G	S		S	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.													.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.						.	.	210	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.								.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.								.	.	.
Query Sequence		L	A	P	L	A	K	V	I	N	D	N	F	G	I	I	E	G	L	M	T	T	V	H	A	T	T	A	T	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	T	V	D	G	P	S	H	K	D	W	R	G	G	R	G	A	S	Q	N	I	I	P	S	.	.	.	.	.	S	T	G	A	A	K	A	.	.	.
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.								.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.								.	.	.
Template Conservation
Template Sequence		L	C	E	V	L	A	P	L	L	A	T	L	D	C	R	Q	L	N	L	T	A	C	L	S	V	S	S	L	G	R	E	G	V	K	E	L	A	R	Q	T	A	E	L	L	N	A	R	P	L	E	P	R	L	F	D	R	Q	I	A	F	N	L	L	A	Q	V	G	A	V	D	A	E	G	H	S	A	I	E	R	R
Template Known Secondary structure										T	T	T														G	G	G	G																	T	T						S	S	S	S	S			T	T			B	S	S	S	S		B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
						215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	V	G	K	V	L	P	E	L	N	G	K	L	T	G	M	A	F	R	V	P	T	P	N	V	S	V	V	D	L	T	V	R	L	E	K	A	A	T	Y	E	Q	I	K	A	A	V	K	A	A	A	E	G	E	M	K	G	V	L	G	Y	T	E	D	D	V	V	S	T	D	F	N	G	E	V	C	T
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																																																		.	.	.
Template Conservation																																																							.	.	.
Template Sequence		I	F	A	E	V	Q	A	L	L	G	E	R	I	G	P	L	N	V	T	C	I	Q	A	P	V	F	F	G	D	S	L	S	V	T	L	Q	C	A	E	P	V	D	L	A	A	V	T	R	V	L	D	A	T	.	.	.	K	G	I	E	W	V	G	E	G	D	Y	P	T	V	V	G	D	A	L	G	Q	D	E	T
Template Known Secondary structure										T	G	G	G	B											S		S	S											S	S														S	.	.	.	T	T						T	T										T	T	S	S
Template Predicted Secondary structure																																																							.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.				.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		291	.			.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure				.	.																							.
Query SS confidence				.	.																							.
Query Sequence		S	V	.	.	F	D	A	K	A	G	I	A	L	N	D	N	F	V	K	L	V	S	W	Y	D	N	.	E	T	G	Y	S	N	K	V	L	D	L	I	A	H	I	S	K
Query Conservation				.	.																							.
Alig confidence				.	.							.	.	.														.
Template Conservation												.	.	.
Template Sequence		Y	V	G	R	V	R	A	G	Q	A	.	.	.	D	P	C	Q	V	N	L	W	I	V	S	D	N	V	R	K	G	A	A	L	N	A	V	L	L	G	E	L	L	I	K
Template Known Secondary structure										S	S	.	.	.		T	T
Template Predicted Secondary structure												.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.				.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions