Job Description P0A9B2 Confidence 94.67% Date Thu Jan 5 11:09:48 GMT 2012 Rank 396 Aligned Residues 143 % Identity 20% Template c2dfdD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of human malate dehydrogenase type 2 Resolution 1.90 Å

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		4	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		K	V	G	I	N	G	F	.	G	R	I	G	R	I	V	F	R	A	A	Q	K	R	S	D	I	E	I	V	A	I	N	D	L	L	D	A	D	Y	M	A	Y	M	L	K	Y	D	S	T	H	G	R	F	D	G	T	V	E	V	K	D	G	H	L	I	V	N	G	K	K	I	R	V	T	A	E	R	D	P	A	N
Query Conservation									.
Alig confidence									.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	A	V	L	G	A	S	G	G	I	G	Q	P	L	S	L	L	L	K	N	S	P	L	V	S	R	L	T	L	Y	D	I	A	H	T	P	G	V	A	A	D	L	S	H	I	E	T	K	A	A	V	K	G	Y	L	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q
Template Known Secondary structure							T	T	T	S	T	T												T	T									S	S	S									T	T	S	S	S	S								S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.																					.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query Sequence		L	K	W	D	E	V	G	V	D	V	V	A	E	A	T	G	L	F	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	T	A	R	K	H	I	T	A	G	.	.	A	K	K	V	V	M	T	G	P	S	K	D	N	T	P	M	F	V	K	G	A	N	F	D	K	Y	A	G	Q	D	I
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation
Template Sequence		L	P	D	C	L	K	G	C	D	V	V	V	I	P	A	G	V	P	R	K	P	G	M	T	R	D	D	L	F	N	T	N	A	T	I	V	A	T	L	T	A	A	C	A	Q	H	C	P	E	A	M	I	C	V	I	A	N	P	V	N	S	T	I	P	I	T	A	E	V	F	K	K	H	G	V	Y	N	P	N	K
Template Known Secondary structure							T	T		S							S					T	T			G	G	G	G																				T	T	S						S	S																T	T				T	T	S
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	N	A	S	C	T	T	N	C	L	A	P	L	A	K	V	I	N	D	N	F	G	I
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		I	F	G	V	.	.	T	T	L	D	I	V	R	A	N	T	F	V	A	E	L	K	G	L
Template Known Secondary structure						.	.																	T
Template Predicted Secondary structure						.	.
Template SS confidence
		148	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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