Job Description P0A9B2 Confidence 100.00% Date Thu Jan 5 11:09:48 GMT 2012 Rank 25 Aligned Residues 302 % Identity 22% Template c2czcD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase from2 pyrococcus horikoshii ot3 Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		I	K	V	G	I	N	G	F	G	R	I	G	R	I	V	F	R	A	A	Q	K	R	S	D	I	E	I	V	A	I	N	D	.	L	L	D	A	D	Y	M	A	Y	M	L	K	Y	D	S	T	H	G	R	F	D	G	T	V	E	V	K	D	G	H	L	I	V	N	G	K	K	I	R	V	T	A	E	R	D	P	A
Query Conservation																																		.
Alig confidence																																		.																											.	.	.	.									.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.									.	.	.	.	.	.	.
Template Sequence		V	K	V	G	V	N	G	Y	G	T	I	G	K	R	V	A	Y	A	V	T	K	Q	D	D	M	E	L	I	G	I	T	K	T	K	P	D	F	E	A	Y	R	A	K	E	L	G	I	P	V	Y	A	A	S	E	E	F	I	P	R	.	.	.	.	F	E	K	E	G	F	E	V	.	.	.	.	.	.	.	A	G
Template Known Secondary structure										S												T		S	S									S	S											T	T						S	S	G	G	G				.	.	.	.				T	T				.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																													.	.	.	.									.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.								70	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		N	L	K	W	D	E	V	G	V	D	V	V	A	E	A	T	G	L	F	L	T	D	E	T	A	R	K	H	I	T	A	G	A	K	K	V	V	M	T	G	P	S	K	D	N	T	P	M	F	V	K	G	A	.	.	N	F	D	K	Y	A	G	Q	D	I	V	S	N	A	S	C	T	T	N	C	L	A	P	L	A
Query Conservation																																																							.	.
Alig confidence																																		.																					.	.
Template Conservation																																		.
Template Sequence		T	L	N	D	L	L	E	K	V	D	I	I	V	D	A	T	P	G	G	I	G	A	K	N	K	P	L	Y	E	K	A	G	.	V	K	A	I	F	Q	G	G	E	K	A	D	V	A	E	V	S	F	V	A	Q	A	N	Y	E	A	A	L	G	K	N	Y	V	R	V	V	S	C	N	T	T	G	L	V	R	T	L
Template Known Secondary structure		B						T	T		S							S	T	T												T	T	.							T	T	S		G	G	G	S	S									G	G	G	G	T	T		S
Template Predicted Secondary structure																																		.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	I	N	D	N	F	G	I	I	E	G	L	M	T	T	V	H	A	T	T	A	T	Q	K	T	V	D	G	P	S	H	K	D	W	R	G	G	R	G	A	S	Q	N	I	I	P	S	S	T	G	A	A	K	A	V	G	K	V	L	P	E	L	N	G	K	L	T	G	M	A	F	R	V	P	T	P	N	V	S
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	I	R	E	Y	A	D	Y	V	Y	A	V	M	I	R	R	A	A	D	P	N	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	G	P	I	N	A	I	K	P	T	V	E	V	P	S	H	H	G	P	D	V	Q	T	V	I	P	I	N	I	E	T	M	A	F	V	V	P	T	T	L	M	H
Template Known Secondary structure					G	G	G												S	S		T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	S				S	S							S	S	S		T						T	T	T	S												S			S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.														.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.					.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																															.	.	.	.																.	.
Query SS confidence																															.	.	.	.																.	.
Query Sequence		V	V	D	L	T	V	R	L	E	K	A	A	T	Y	E	Q	I	K	A	A	V	K	A	A	A	E	G	E	M	.	.	.	.	K	G	V	L	G	Y	T	E	D	D	V	V	S	T	D	.	.	F	N	G	E	V	C	T	S	V	F	D	A	K	A	G	I	A	L	N	D	N	F	V	K	L	V	S	W	Y	D
Query Conservation																															.	.	.	.																.	.
Alig confidence																															.	.	.	.																.	.
Template Conservation
Template Sequence		V	H	S	V	M	V	E	L	K	K	P	L	T	K	D	D	V	I	D	I	F	E	N	T	T	R	V	L	L	F	E	K	E	K	G	F	D	S	T	A	Q	I	I	E	F	A	R	D	L	H	R	E	W	N	N	L	Y	E	I	A	V	W	K	E	S	I	N	I	K	G	N	R	L	F	Y	I	Q	A	V	H
Template Known Secondary structure										S	S													T	S	T	T						G	G	G	T			S											T	T		G	G	G				S					G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	T	G	Y	S	N	K	V	L	D	L	I	A	H	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	S	D	V	I	P	E	N	I	D	A	I	R	A	M
Template Known Secondary structure		T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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